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berkeley_reactor_200306_planktonic_scaffold_220416_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 9115..10830

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase, family 28 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RD8_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 569.0
  • Bit_score: 626
  • Evalue 1.60e-176
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 569.0
  • Bit_score: 626
  • Evalue 4.50e-177
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 583.0
  • Bit_score: 673
  • Evalue 1.60e-190

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1716
ATGCCACACACAAATTCAAATTCCTTGTCGCGACGCAAATGGCTTGGACTGGCGACCGTTTCAGCAGTGGGAACCTCGCTGAGTTCCAACCTCCTGGCCGCGCCAGCAAAAGCCGCCGCCCCCGCAACCGGAAGCGGCGGCCAGGATCATGAACGCGGCGCGCGCACCTATAACATCCGCGATTTTGGCGCGCAGGGCGACGGCACCACGTTGGACACGGCGGCCTTGCAATCGGCCGTTGATGCGTGCCATCGGGACGCCGGCGGAACCGTGCTGGTGCCGGCGGGCGTGTTCGTCATTGGCACGGTGGAATTGAAAAGCAACGTCACCCTGCGGATTGCCGCGCAGGGCACACTGCTCGGCAGCGGCCACGGCGGGGATTATTACGCCGCCGAAAAAATTCCGTTGCACGGCGACGCCACGCTGGAAGACGGCCACGTCGGCCTGCTCTTTGCCGTCAACGCCGAAAACATCACGATTGAAGGACCGGGAACGATTGATGGCCGGGGCGATTTGTTTTACCACCAGCGCGGCAGTCCGCCGCCGCCGGCCGGCATCAGCGGGCCGCATCGGCCGTATCACCTGCTGTTTTACCAGTGCCAAAACCTGACGGTGCGGAACATTTTTTTGAAGGACAGCGCGTTTCATTCCGTGCGCATCATCCAGAGCGATTATGTCTGGCTGACCGGCATTCACATTCACAGCCGGCGCATCAACAACAGTGACGGCTTTCACTTCATCAGCGCCCGTTACGTTCACCTCAGCGACTGCGATGTGCAAACCCAGGACGACGCCTGCGCGCTGTTCGGCAGTTGCCAGTTTGTGACGGTGAGCAACAGTTCCTTCAGCACGCGCTGGTCGGTCTTTCGTTTTGGCGGCGGGGTGGCAAAAAACATCACGGTTTCCAATTGTCTCATCTACGAAACCTACGGTTGCCCGATCAAAATGCGGTGCAGTCCCGGCTCGCGCTTTGAAGATATTTCGTTTTCCAATCTGGTGATGAAGGATGTGACCGGGCCGATCTCCATCGGCAATAGTCCACACGGGCGGCGTCATTCGGATTCCCCCGCTTCCGACAGCGGCGAAGAAAAGCCGGGCATCGTTCGCAACATTTCGTTCAACGGCATTCACGCCGTCGTGACGAAACCGGTGCCGCTGCCGGATTGTCCGTTCGTCAGCAAATACAATCCGGGCGAAATTTTTTCGTGCATCACACTCAATGCCTTTGACGAGGCGTTTTTGGACAACATCAGCTTCAACGATGTGCATGTGATTTTCCCCGGCGGCGGCACGGCAGAACAGGCGGCGGTGCGCGACGTGCCGAAAGTCGCCGGTGAATATTATACGATGGGGGTGCCTCCGGCCTGCGGAATGTTCGCCCGCAACGTGCGGGGATTGACGTTGCAAAACGTGCGCTTTGAAACGGTCACCCCAGATATGCGGCCCGTCTTGGCATGGGATCATGTCTCTGACGCAACCGTGAACGGCTTCAGCGTCCGGGGCGATCCCCATGCGGAATCCGCCCTCCGGTTCATGGACACGCGCGACATCTTGGTAAGCGCCGCCCGCCTGACCGCCCCCGCCGCGATTTTTCTCCAGGTTGAAGGTGCTGACAGCCACGCCATCACCATTGACGGCGGGGATCTTTCAAAAGCGGCCACGCCACTGGCATTCAAAGATAACGCCGACGCAAGCGCGGTAAAACTGCGCGGCTAA
PROTEIN sequence
Length: 572
MPHTNSNSLSRRKWLGLATVSAVGTSLSSNLLAAPAKAAAPATGSGGQDHERGARTYNIRDFGAQGDGTTLDTAALQSAVDACHRDAGGTVLVPAGVFVIGTVELKSNVTLRIAAQGTLLGSGHGGDYYAAEKIPLHGDATLEDGHVGLLFAVNAENITIEGPGTIDGRGDLFYHQRGSPPPPAGISGPHRPYHLLFYQCQNLTVRNIFLKDSAFHSVRIIQSDYVWLTGIHIHSRRINNSDGFHFISARYVHLSDCDVQTQDDACALFGSCQFVTVSNSSFSTRWSVFRFGGGVAKNITVSNCLIYETYGCPIKMRCSPGSRFEDISFSNLVMKDVTGPISIGNSPHGRRHSDSPASDSGEEKPGIVRNISFNGIHAVVTKPVPLPDCPFVSKYNPGEIFSCITLNAFDEAFLDNISFNDVHVIFPGGGTAEQAAVRDVPKVAGEYYTMGVPPACGMFARNVRGLTLQNVRFETVTPDMRPVLAWDHVSDATVNGFSVRGDPHAESALRFMDTRDILVSAARLTAPAAIFLQVEGADSHAITIDGGDLSKAATPLAFKDNADASAVKLRG*