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berkeley_reactor_200306_planktonic_scaffold_269654_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 9595..10764

Top 3 Functional Annotations

Value Algorithm Source
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 387.0
  • Bit_score: 498
  • Evalue 8.10e-138
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSG1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 387.0
  • Bit_score: 498
  • Evalue 5.80e-138
pyrD; dihydroorotate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 404.0
  • Bit_score: 357
  • Evalue 4.50e-96

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGGCTGGCTGCATAAAAAATTGATTCGTCCCTGGCTGTTCCGGCAGGATTCTGAAACGGCTCATAATTCCGCCGTCAGAACACTCGCCCGCGTCAGCCGCAGCACCTTTGCCTGCGGCGTGGTGAAAGCCCTTTATGGCGCTCCGGAATTGCCGGTCGAACTGTGGAACTTGCGGTTTCCCAATCCGGTTGGCCTGGCCGCCGGCATGGACAAACACGCCGCCGCCGTTCCCGGCTGGGCCGCGATGGGTTTTGGCTTCACCGAACTGGGCGGCGTGACCTGGCACGCGCAGCCCGGCAATCCGCCGCCGCGAATGTTCCGGGCGATTCCCGACGAAGCTGTCATCAACCGCATGGGCTTCAACAACTCCGGCGCCGAAGCCGTGGCGCAAAAACTGGCCGCCTGGAAAAAATCGGGGCGCTGGCCGGATCATCCCGTCGGCATCAACCTCGGGAAATCCAAAATCACCCCACTGGACAAAGCCGCCGAGGACTACGCCAGTTCCTTTCGCGTGCTGCGCGGACTGGCGGATTTTTTCGTCGTCAATGTCAGTTCGCCGAACACGCCCAACCTGCGTCAGTTGCAAGACAAGGCGGCGTTGGATGAGATTTTCGCCGCGCTTCAGGAAATCAACGGAACGGCATCTCGACAGAGTGCCGCAACTAATTCGCATTCGCCCGCCCCTTCAGCGGCGCTCTCCCAAGCCGCCGCCACGCCTATCTTGGTAAAAGTTGCGCCGGACCTGAGTTTCGCCGCGCTGGATGAAATTCTCGAACTGGTCGCCCCGCGCCGCATCGCCGGCATTGTCGCCACCAACACCACCATCACGCGTCCGCAAACCAATGACGCTGCCCTGCAAACAGTTTACGCCGAAACGGGCGGTTTGAGCGGCAAACCGTTGCGCGCGCGCAGCACGGAAATCATCCGGCACTTGTATCGGCAGACGAACGGCAAGGTGCCGATCATCGGCGTCGGCGGGATTTTCACTGCGGACGATGCCTGGGAAAAAATCACCGCCGGCGCGACGCTCGTGCAGGCTTATACCGGTTTGGTTTATGAAGGCCCAAGCCTGGCTGGAAACATTGTGCGCGGCTTGCGCCAGAAACTTGCTGCCGGCGGATTGAACGATTTGAAAGCTGCCGTTGGTTTGGAAAACAAAAATGCTTAA
PROTEIN sequence
Length: 390
MGWLHKKLIRPWLFRQDSETAHNSAVRTLARVSRSTFACGVVKALYGAPELPVELWNLRFPNPVGLAAGMDKHAAAVPGWAAMGFGFTELGGVTWHAQPGNPPPRMFRAIPDEAVINRMGFNNSGAEAVAQKLAAWKKSGRWPDHPVGINLGKSKITPLDKAAEDYASSFRVLRGLADFFVVNVSSPNTPNLRQLQDKAALDEIFAALQEINGTASRQSAATNSHSPAPSAALSQAAATPILVKVAPDLSFAALDEILELVAPRRIAGIVATNTTITRPQTNDAALQTVYAETGGLSGKPLRARSTEIIRHLYRQTNGKVPIIGVGGIFTADDAWEKITAGATLVQAYTGLVYEGPSLAGNIVRGLRQKLAAGGLNDLKAAVGLENKNA*