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berkeley_reactor_200306_planktonic_scaffold_269654_17

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(21402..22952)

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 28 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDM6_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 501.0
  • Bit_score: 448
  • Evalue 9.10e-123
endopolygalacturonase similarity KEGG
DB: KEGG
  • Identity: 50.1
  • Coverage: 489.0
  • Bit_score: 445
  • Evalue 1.70e-122
Tax=GWB2_Ignavibacteria_35_6b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 526.0
  • Bit_score: 479
  • Evalue 5.20e-132

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Taxonomy

GWB2_Ignavibacteria_35_6b_curated → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 1551
ATGAACTGGAAAAAATATGCGAGTCGTCATCTGTTGGCATTGTGGGCCGTTGCGCTGCTGTCGGTGACGCCGGGCCTGCGGGCGGCCGGTGCCGGGACGGTGTTCAACGTGCGCGATTACGGCGCGGTGGGCGACGGCAAGAACCTCGACAGTCCGGCGATTGACAAGGCGATCGAAGCGGCGGCTTCCCAGGGCGGGGGAACGGTGCGGGTGCCGGCGGGAACCTATTTGAGCGGTTCGATTCATCTCAAAAGCAACATTCATCTGGTGATTGATGCCGGCGCCACTCTCCTGGGCGCGCCGCAGAGCCTGAATGCCTACGATGAAACCGAGCCTTACAACCTGGGCGGGTATCAGGACGGCGGCCATTGTTATTTTCACAACAGCCTGATCTGGGGTGAAAATCTCACCAATGTTTTTATCACCGGCCACGGCATGATCAACGGCGGCGGGTTGGTCCGCAGCGACGGGATATTGGATCGCATGTGCGGGTTTCACGACTGGCAGCATCCCAAGACGAACAACCTGCCGCCGGTGCGCTTGGGCAACAAGGCCATTGCGCTGAAACTTTGCCGGAATGTGCTCATCCGTGACGTCACCATTTTTCACGGCGGACATTTCGCCATTTTGGTGACGGGTTGCGACAATTTGACGGTGGACAATGTCACCATGGACACGGATCGCGATGGCATTGACATTGACTGCTGCCGCAACACGATGGTGAGCAACTGCCGCATCAATTCGCCGAACGATGACGGCCTTTGCCCGAAGAGCACGCATGCCCTGGGCGAATTACGCCCGACGGAAAACTTGACCATTGTCAACTGCCAGGTGTCCGGTTTCAAGGAGGGCACGCTGCTGGACGGCACGATGCAGCCCAGCAAAAATCACAACGGCCGCATCAAGTTCGGCACGGAATCCAGCGGCGGCTTTCGCAATTGCACGGTCGCCAACTGCACGTTCCGCAGTTGTCGCGGGCTCGCGCTGGAGGAGGTGGATGGCGGCATCATGGACAACATCACGATCAACAACATCACCATGATGGATGTGCCGGATTATGCGATTTACATCACCACCGGCGAGCGCAACCGCACGCCGGGAGTGACCACGAACAGCCGGATGCGGAATATTTTCATCTCCAATGTCATCGCGGACGGCGTCGGCAAAATGAGCGGCATTCAAATCATGGGACTGCCCGGGCAGCCGATTGACGGCGTCCGGCTGCAAAACATCCGGCTGATTTCCCGCGGCGGCGGCACCCGCGACGAGGCGGCCATCCAGCCGAAGGAACTCGGCGACGGCTATCCCGAACCGCGAAAATTGGGAACGTTGCCGGCTTACGGGGTTTTTGCGCGGCACGTGAAAGACCTGGAACTGGCGGATGTTCACGTCAGTTTCGCATCCGAGGATCTCCGGCCGGCGGCGGCCTTCACGGATGTGCAGGGGCTGGAACTGGACAACTTCAACCCGGAGGTGGCCGCCGGTGTCACGCCCGCCACGTTCAAGGATGTGACGGACAAAACCATCCGGAATTCGCCCCGCCTGCAATAA
PROTEIN sequence
Length: 517
MNWKKYASRHLLALWAVALLSVTPGLRAAGAGTVFNVRDYGAVGDGKNLDSPAIDKAIEAAASQGGGTVRVPAGTYLSGSIHLKSNIHLVIDAGATLLGAPQSLNAYDETEPYNLGGYQDGGHCYFHNSLIWGENLTNVFITGHGMINGGGLVRSDGILDRMCGFHDWQHPKTNNLPPVRLGNKAIALKLCRNVLIRDVTIFHGGHFAILVTGCDNLTVDNVTMDTDRDGIDIDCCRNTMVSNCRINSPNDDGLCPKSTHALGELRPTENLTIVNCQVSGFKEGTLLDGTMQPSKNHNGRIKFGTESSGGFRNCTVANCTFRSCRGLALEEVDGGIMDNITINNITMMDVPDYAIYITTGERNRTPGVTTNSRMRNIFISNVIADGVGKMSGIQIMGLPGQPIDGVRLQNIRLISRGGGTRDEAAIQPKELGDGYPEPRKLGTLPAYGVFARHVKDLELADVHVSFASEDLRPAAAFTDVQGLELDNFNPEVAAGVTPATFKDVTDKTIRNSPRLQ*