ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_269654_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 24931..25944

Top 3 Functional Annotations

Value Algorithm Source
Hopanoid-associated sugar epimerase id=3917296 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 336.0
  • Bit_score: 334
  • Evalue 9.60e-89
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 335.0
  • Bit_score: 331
  • Evalue 2.30e-88
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 336.0
  • Bit_score: 334
  • Evalue 1.30e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGATGAAATGCTTTGTCACCGGCGCCTCCGGATTTATCGGCTCCAATCTGGTCCGGGAACTGGTTGCCCGCGGGCACCGGGTCAAAGCGCTGCTCCGCCCCGATGCGGACGAACGCGGTTTGTCCGGGGTCGCGTTCGAGCGAGTGACCGGAGACATCCTTGACTTCCAGCGGGTGCAATCGGCGTTGGAAGGCTGCGACTGGTGCTTTCATGCCGCCGCCAGTTATCACCTTTGGATGCGCCATTATTCCGTCATGCACCGGGTGAATGTGGACGGCACGCGCAACGTGCTCGCGGCCGCCGGCCGCGCCGGCTGCCGGAAAATTGTTTACACCAGCACGGTCGGCTGCATCCGCGTTCCGCCGCCGGTGAACGGCCGATACACGCCGACGCGCGAGACGGATCTGGCCACGGAAGCGGAGATGGGCAATGACTACAAATTGTCGAAGTTCCGGGCGGAAGGCGTGGCGCTGGAATTGTTTCGTCAATCCGCCCTGCCCGTCATCATCGTCAACCCCTCCGCACCCATCGGCCCCGGCGACGTCAAACCCACGCCCACCGGGCAAATTGTTGTGGATTTTCTGAACCGCAAAATGCCGGCCTACCTGGAAACGGGACTCAACTGGGTGCATGTTCGCGACGTGGCCGTCGGCCACATTCTCGCGGCGGAACACGGACGCTTCGGCCAGCGCTACATTTTGGGCAACCAGGCGGGCAACTGGACGATCCAGCAGACCTTCGAGCTGCTGGCGAAGCTGACCGGCATTCCCGCCCCGAAAATCAAAATACCGCATTGGGTTGCCGGCCTGCTGGCGGAAGCGGGGGAATGCGTCGCCGGCTTCACCGGCAAACCGCCCCGCGCCACCCGGGCGGGCGTCTGCATGGCGAGGGACCGCATGTGGTTCAATCCCGAAAAAGCCATCCGCGAACTGGGCCTGCCGCAAACGCCCCCCGAACAGGCCTTCGCCGATGCCGTGGCGTGGTTTCGCGCCCATGGTTATGTGAAAAAATAA
PROTEIN sequence
Length: 338
MMKCFVTGASGFIGSNLVRELVARGHRVKALLRPDADERGLSGVAFERVTGDILDFQRVQSALEGCDWCFHAAASYHLWMRHYSVMHRVNVDGTRNVLAAAGRAGCRKIVYTSTVGCIRVPPPVNGRYTPTRETDLATEAEMGNDYKLSKFRAEGVALELFRQSALPVIIVNPSAPIGPGDVKPTPTGQIVVDFLNRKMPAYLETGLNWVHVRDVAVGHILAAEHGRFGQRYILGNQAGNWTIQQTFELLAKLTGIPAPKIKIPHWVAGLLAEAGECVAGFTGKPPRATRAGVCMARDRMWFNPEKAIRELGLPQTPPEQAFADAVAWFRAHGYVKK*