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berkeley_reactor_200306_planktonic_scaffold_255293_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 11628..12815

Top 3 Functional Annotations

Value Algorithm Source
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 366.0
  • Bit_score: 490
  • Evalue 1.30e-135
alanine racemase (EC:5.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 369.0
  • Bit_score: 303
  • Evalue 6.00e-80
Alanine racemase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMA7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 366.0
  • Bit_score: 490
  • Evalue 9.40e-136

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1188
ATGAATTTGAATTCGGACAATTTTCCGCTGCGCCCTGCCTGGACCGAGATTGATCTCGGCAGGCTGCGCCGCAACCTGCAGTTGATCCGCCGCGATTTGCCACCGCACGTCAAGCTGCTCGCCGTGGTGAAGGACGAGGCTTACGGCCACGGCGCGTTGGATGTCGCGCGCATCGCGCACGAAGAGGGCGCGGAGTATTTCGGCTTGAGCACGCTCGAAGAAGCCATGTCCCTGCGCGAAGGCGGCATCACCGCGCCGCTCCTGCTGCTGGGCGAACGCCAGGAAGCCGAGCTGCCCTGGTGCGTGGCCCATGATCTGACGGTTTGCGTCAATGAACCGCACGCCGTGCGCCAGCTGGCCAAACTCGGCGCCGAATTCGGCAAACGCGTGCCGGTTCACGTCAAAATCCACACCGGCATGAGCCGCTACGGCGTCCGCTGGGATGAAGCCGTGCCGCTCATTGAGCAGGTCGCCGCCGAAAAATCCCTGTTCCTGGAAGGCGTGATGACGCACTTCTCGCAATCGGACGAAACGGACAAGACGTTTGCCAACCTGCAATTTTCCCGGTTCGAAGACGTGCTGTCCGCAATGAAACAGAAGGGAATTTCCGTGAAATTGCGCCACACGTGCAACAGCGGCGGTTTCCTCGACCTGCCGCACGCGCATCTGGACATGGTGCGCGTGGGCATCCTGCTCTACGGCGTTTTTCCCTCGACGGTTTGCCGCAAAATTCCCGGCATCGAACCGGTCATGTCGGTGAAGGCCCGGATTGCGGCGATCCAAAAAATTAAACCCGGCGAAGTCGTCGGCTACGGCATGCGTTACACCGCGCCGTCGGAACGGCGGATCGCCATCCTGCCGATCGGTTATGGCGATGGCTTCCCGCGCGTGCGCAACGAAGGGTGCGCGCTCATCCACGGCCGGCGCGCGCCGCTCGTCGGCGGCATCGCGATGGACGCGTTGATGGTGGACATCACCGACATTCCCGAGGCGAAAATGTGGGATGAAGCGGTGCTGATGGGCCGCCAGGGCAACGACGAAATCACCGTGCGCGACATCGCCGCGTTGAAAAAATCGGTGACCTATGATGTGCTGACCAACTGGCGGCTGCGGTTGCGCCGCCAATCCGTCAATGGTTCAACCCCGCAGCCACACAAATCAACCCGCCGGGAAGCCGCCCGAACCTGA
PROTEIN sequence
Length: 396
MNLNSDNFPLRPAWTEIDLGRLRRNLQLIRRDLPPHVKLLAVVKDEAYGHGALDVARIAHEEGAEYFGLSTLEEAMSLREGGITAPLLLLGERQEAELPWCVAHDLTVCVNEPHAVRQLAKLGAEFGKRVPVHVKIHTGMSRYGVRWDEAVPLIEQVAAEKSLFLEGVMTHFSQSDETDKTFANLQFSRFEDVLSAMKQKGISVKLRHTCNSGGFLDLPHAHLDMVRVGILLYGVFPSTVCRKIPGIEPVMSVKARIAAIQKIKPGEVVGYGMRYTAPSERRIAILPIGYGDGFPRVRNEGCALIHGRRAPLVGGIAMDALMVDITDIPEAKMWDEAVLMGRQGNDEITVRDIAALKKSVTYDVLTNWRLRLRRQSVNGSTPQPHKSTRREAART*