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berkeley_reactor_200306_planktonic_scaffold_310271_48

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 56526..56993

Top 3 Functional Annotations

Value Algorithm Source
MerR, DNA binding family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRP9_9SYNE similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 136.0
  • Bit_score: 122
  • Evalue 3.40e-25
MerR, DNA binding family {ECO:0000313|EMBL:EDX83811.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 136.0
  • Bit_score: 122
  • Evalue 4.80e-25
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 142.0
  • Bit_score: 111
  • Evalue 1.70e-22

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Taxonomy

Synechococcus sp. PCC 7335 → Synechococcus → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGCAGAAATTGCGCTTGAAAGTTGGTCAATTGGCGGCGCACGCCGGAGTGGGTGTGCAGACGCTGCATTATTATGAGCGGCTTGGACTCTTGGCGAAACCCGACCGCTCCGCGTCGAACTATCGCCTTTACCCTGACGATGCCCTGCGCCGGGTTCAGTTCATCAAGAAAGCTCAATCGCTCGGTTTTACCTTGGAGGAAATCAAAGAGATTCTCGGACTGCGCGAGCAAGGCTGCGCTCCCTGTCGTTGTGTGGCCGACGTGGGCAAGAAGCACTTGCAGGAGTTGGATGCGCGCATTGCAGCGTTGCAGAAGTTTCGACGGGCGTTGGCCAAAGTCATGCCCAAATGGGAAAGGGAAACGGCGCATCAACGCGTGTGCGCGGGCGAGTTTTGCGATTTAATCGAGCGTTTGCCCATAAAATTGCCACCCGGACCAGCTCAAAAAAAATTAATAAAAGCCCCTTGA
PROTEIN sequence
Length: 156
MQKLRLKVGQLAAHAGVGVQTLHYYERLGLLAKPDRSASNYRLYPDDALRRVQFIKKAQSLGFTLEEIKEILGLREQGCAPCRCVADVGKKHLQELDARIAALQKFRRALAKVMPKWERETAHQRVCAGEFCDLIERLPIKLPPGPAQKKLIKAP*