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berkeley_reactor_200306_biofilm_scaffold_3161_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(15389..16480)

Top 3 Functional Annotations

Value Algorithm Source
squalene-hopene cyclase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 364.0
  • Bit_score: 289
  • Evalue 8.20e-76
Probable squalene-hopene cyclase {ECO:0000313|EMBL:CAD72952.1}; EC=5.4.99.- {ECO:0000313|EMBL:CAD72952.1};; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica (strain SH1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 364.0
  • Bit_score: 289
  • Evalue 4.10e-75
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EB72AA similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 316.0
  • Bit_score: 350
  • Evalue 1.10e-93

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Taxonomy

Rhodopirellula baltica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1092
ATGTGTAGCGAGGCGCGGGGTCTGTCGGGCTGGCCGCGGAAGGCCGCGCGTTGGGTAGTCTTTGCGGCGGCCGTCGCCCTCGCGGTGGCGGCGGTCGCCTCGAACGCGGGGCGGTCGACGTTCGGGGCTGAGTTGTCCCCGAACACGCCCGACGAGCCGGTCGCGCCGACCTATTCGCCGGCAAAGGCGGCCGAGTTCCTCGACGCCGTCGCGCTCGACTGGACCGAGAAACGCCAGTGTGGGGCCTGCCACACGAACTACGCCTACCTGATCGCGCGGCCGGTGCTCAAAGGGGAGCCGTCGGCGGCGCCGGCCGAGATCCGGACGTTCTTTGAAGACCGCGTCGCCCACTGGGACGACGCAGAGAAGGCGGCCAAGCCGCGCTGGGACGCCGAGGTCGTCGCCACCGCCTCGGCGCTGGCGCTGAACGACGCGCTCACGACCGGCACGCTCCACCCGCGGACCCGCCAGGCGCTCGACCGGATCTGGACGTTGCAGAAGGCCGACGGGTCGTGGTCGTGGCTCAAATGCGACTGGCCCCCGTACGAGCACGACGACTACTACGGCGCCGTCTTCGCCGCGCTCGGAGTCGGCTCGGCCCCCGGCGGTTACGCGCGGTCCGAGGCGGCCCGGAAGGGACTCGACCGGCTACGGTCGTACCTGAACGCGACCCCGGCCCCCGACCTTCACCACAAGACGTTCCTGCTATGGGCCTCGACCAAACTCGACGGCCTGATGACCAAGGCCGCCCGCGACGAGACGGTGGAGCGGCTGCGGGCTCTCCAGCGGCCTGACGGGGGCTGGAGCCTGCCGTCGCTCGGCGACTGGTCACGCCGCGACGGTTCGCCGAACGACAAGGGGGCCCCGGGCGACGGCTACGCCACGGGCCTGGTCGTCTATGTGCTCCGCCAGGCGGGCGTGCCGGCCGACGACCCGGCCGTGCGCCGGGGGGCCGAATGGCTCAGGACGCACCAGCGGGCCTCGGGACGCTGGTTCACCCGGTCGCTCAACAACGACAAGGCCCACTACATTGCGAACGCGGGGACCGGGTTCGCCGTGCTCGCCCTCTCCGCTTGCGAAGCGCCGCGTTAA
PROTEIN sequence
Length: 364
MCSEARGLSGWPRKAARWVVFAAAVALAVAAVASNAGRSTFGAELSPNTPDEPVAPTYSPAKAAEFLDAVALDWTEKRQCGACHTNYAYLIARPVLKGEPSAAPAEIRTFFEDRVAHWDDAEKAAKPRWDAEVVATASALALNDALTTGTLHPRTRQALDRIWTLQKADGSWSWLKCDWPPYEHDDYYGAVFAALGVGSAPGGYARSEAARKGLDRLRSYLNATPAPDLHHKTFLLWASTKLDGLMTKAARDETVERLRALQRPDGGWSLPSLGDWSRRDGSPNDKGAPGDGYATGLVVYVLRQAGVPADDPAVRRGAEWLRTHQRASGRWFTRSLNNDKAHYIANAGTGFAVLALSACEAPR*