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berkeley_reactor_200306_biofilm_scaffold_34852_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 20592..23948

Top 3 Functional Annotations

Value Algorithm Source
SMC domain protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UEG7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 1205.0
  • Bit_score: 557
  • Evalue 1.80e-155
Uncharacterized protein {ECO:0000313|EMBL:KGM43377.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 1184.0
  • Bit_score: 701
  • Evalue 1.80e-198
SMC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 1168.0
  • Bit_score: 547
  • Evalue 6.70e-153

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Notes

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Taxonomy

Spirochaeta sp. JC202 → Spirochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 3357
ATGCGTATCGACCGCCTCGACCTGATCGCCTTCGGACCGTTCACCGACGCCGTGCTCGACCTGTCGGGCGGGGCGGAAGGGCTTCACCTGGTCTACGGGCCGAACGAGGCGGGGAAGTCGTCGGCCCTGCGCGCGATCAAGCAGTTCTTCGGCCGAATCCCCAACCAGTCGACGGACAATTTCGTCCATAAGCACGCCGACATGCGGATCGGCATGGTGCTCCGCGGGCGCGGCGGGTCGCCGGTCGAACTCGTCCGGCGCAAGGGGATCAAAAACACGCTCCTGGGCCCCGACGACGCCGAGGCCCGCCTCGACCGGATGCTCGGCGGGGTCTCCCCCGACGAATTCCTCCGCAAGTTCGTGATCGACCACGGGGAGTTGATCGAAGGGGGCAGGGGGGTGGTGGAGGGTCGGGGCGACCTGGGACAGGTGCTCTTCTCGGCCGGTTCGGGCTTCGCCGGGCTCGGGGCCGTGCGGAAGGCCCTCGACGAACAGGCCGAGGCCCTGTTCAAGCGGGGCGGCTCCAAGCCCGCGATCAACGCCGCGCTCGCCGCCCTCGAAGCCGAGCGGAAGCGGATCAAGAACGACACCCTCCGGTCGTCCGACTGGCTCGCCCACGACGAAGCCCTCCGCGACGCCCTGGCGCGCAAAGCGGCCCTGGAGCGCGAACTCGAAGAGGCCGGGCGCGAGCGGAACCGCCTGACCCGCCTGCATAGCGCGGTCGGCCCGATCGCCCGCCGCAAAGCCGCCCTCGACGAACTCGCCGGGCTCGCGGGCGTCCCCCTGCTCCCGGCCAATTTCACCTACCGCCGCAAGGAAGCCCTCTCGTACATCCAGGTCAACGAGAAGCAGGAGTCCGACGCCCTCCGCGCCCTCGTCGAAGTCGACCAGGCCCTCGAATCGCTCGACGTCCCCGGCCCCCTCCTCGACCAGGCCGGGGCGATCGAAGACCTTCACCTGCGGCTCGGCCGTTATCAGCAATCCGCGCGGGACCGCGACCGGATCGACGCCGAGCGCGGCCGGGTCGACGCCGAAGCCCGCGCCCTTCTTCGCGACCTCGGCGTCTCGGGCGACGACCCGGGTCGGCTCCGTCTGACCGCCGCCGAACGTGCCGCCGTCCAAGACCTGGCCGGCGAACGCCAGGCGCTCGCCCGGACCCGCGACGCCCTGGAGGCGGACCTGAAGGCCCACGCCGCGAAGCGGTCGGCCGCCGCCGACAAGCTGGCCGCCCTCGGCCCCGAGCGCGACCCGGCCCCGCTCCGCAAGGCGGTCAAGCAAGCCCAGGCCCTTGGACCGGTCGAAGCGCGTCGGGACGAAGGCCGCCGGGCGCTCGCCCGCGACGAGCGCCGCGCCGACGAAAAGCTCGCCGCCCTCGGCCTCTGGTCCGGCCCGCTCGACGCCGTCGAACGCCTGGCCGTCCCGACGGCCGAACGGATCGAACTCTTCCGCGACCGTTTCTCCGCCGGCGAAGTCCTTCAGGACGACCTGCGCCGCAAGGCCGACGAACTCGACGCCCAGGCGCGGCTGGTCGACGCCCGGCTCGAAGAGTTGCGGCTCGCCGGCGACGTCCCCACCGAAGACGCGCTGGCCGAGGCCCGCGCGCGGCGCGACGACGCCTGGCGCCGGCTGAAGCAAACGCGGACCTGGAACGACGCCGACGGTGCCGCTTTCGAAGCCGATGCGGCCCGGGCCGACGACCTCGCCGACCGTCTCCGCCGCGAAGCCGGCCGCGTGTCCGACCGCGCCCGCTTTCTCGCCGACCGCGCCCGCCTCGAAGCCGACCGCGACGCCCTCCGCGCCCAGGTCGCCGACGCCCGGTCACGACTCGAACTGACCCGCGCCGAGTGGGCCGCCCTCTGGGAGCCTTTGGGGATCGCCACCCCGTGGCCCCCGCGCGAGATGATCGCCTGGCTCCGCCGCCACGCCGAGCTTGCCGCGCTCGCCGGCTCGATCCGCGAAGCCCGCGAAGCCGTCGATGAACTCGACCGTCAAATCGACGTCCACCGCTCCGCGCTCGTCCAGGCCGTCGCCTCGGCCGGCGCGCCGACGGGCGAGCCCGACGAACCGCTCGCCGACCTGATCGAGCGGGCCGAGGCGGTGGCCGACGCCCTCGCGGAAGCGTCGTCGACCCGTAAGCGGCTCTCCAAGGACGTCGACACCCTGGACCTCGAACGCCCCGCCCTCGAAGACCGGGCGGCGGCGGCCCGCGCCGAGTGGTCGCGGTGGGAGGCGCGCTGGGCCGACGCCATGAGCCCCCTGAACCTCCCGGCCGACGCCCTCACCGCCCAGGCCCACGCCGTCCTGAACAAGACCGCCGAGTTGTTCGACCGCCTGGACAAAGCCGGGGCCCTCGCCGCCTCGCTCGACGAACTCGACCGCGAGTCCGCCCGCTTCACGCGCGACGGCCTGGTCGCCCGCCGCCTCGAACTGGCCCAATCCGCCGCCGCCGCGGGCGACACGATCGCCGAGATGCGGGGCCGCCTCGCCGCCCTCTGCCGCGAGGCGCGGTGCCCCGACGAGGACGACCTCCCCGACCTGGAGGTCCGCTCCGCCCGCCGCCAGGCCGTCGAAAAGGAACTCGCCGACCTGAACGCCCGGCTCCTTGAACTCGCCGCCGGCGCCTCGCTCGACGCCTTCCTCGCCGAAGCCGACCGGACCGACCCCGACGGCCTCCCCCCGCGGATCGACCACGTGAACGCCGCGATCGCGTCCCTGGAGCGCGAACGCGGCGAGGTCGACCAGGCGATCGGCCGCGAGAAGGCGATCCTCTCCCTGATGGACGGCGGCCCCAAGGCCGCCGACGCCGGCCAGGAGGCCGAAAGCCTCCGCGCCCGGATCAAGGAGGACGTCGAGCAATACGCCCGCCTCCGCCTCGCCTCGGCCGTGCTCAAGACCGGGATCGAGCGCTACCGCGAAAAGGTCCAAGGGCCGGTCCTCGCCCGCGCCTCGGCGCTCTTCTCCGCGCTCACGCTCGGCTCGTTCGAGGGCCTACGGGTCGACTACGACGAGAAAGACGAGCCCGTCCTCAAAGGCGTCCGCCCCGGCGGCCGGGAGGCGCTCGGCGTCGAATCCATGAGCCTCGGCACGGCCGACCAGCTCTACCTGGCCCTCCGCCTCGCCGCCCTGGAAGTCGACCTCGACCGCCGCGAGCCCCTCCCGCTCGTCGTTGACGACATCCTCATCCAGTTCGACGACGCCCGCGCCGCCGCCACCCTCGCCGCCCTGGCGGCGCTCTCCCGGCGCACCCAGGTCCTCGTCTTCACCCACCACCGGCACCTTCTCGACCTCGCCTCGTCCGTCGTCCCCCCTCCCGACCTGATCACGCACACCCTCCCCGGGCACCGTCTGACGGCTTAA
PROTEIN sequence
Length: 1119
MRIDRLDLIAFGPFTDAVLDLSGGAEGLHLVYGPNEAGKSSALRAIKQFFGRIPNQSTDNFVHKHADMRIGMVLRGRGGSPVELVRRKGIKNTLLGPDDAEARLDRMLGGVSPDEFLRKFVIDHGELIEGGRGVVEGRGDLGQVLFSAGSGFAGLGAVRKALDEQAEALFKRGGSKPAINAALAALEAERKRIKNDTLRSSDWLAHDEALRDALARKAALERELEEAGRERNRLTRLHSAVGPIARRKAALDELAGLAGVPLLPANFTYRRKEALSYIQVNEKQESDALRALVEVDQALESLDVPGPLLDQAGAIEDLHLRLGRYQQSARDRDRIDAERGRVDAEARALLRDLGVSGDDPGRLRLTAAERAAVQDLAGERQALARTRDALEADLKAHAAKRSAAADKLAALGPERDPAPLRKAVKQAQALGPVEARRDEGRRALARDERRADEKLAALGLWSGPLDAVERLAVPTAERIELFRDRFSAGEVLQDDLRRKADELDAQARLVDARLEELRLAGDVPTEDALAEARARRDDAWRRLKQTRTWNDADGAAFEADAARADDLADRLRREAGRVSDRARFLADRARLEADRDALRAQVADARSRLELTRAEWAALWEPLGIATPWPPREMIAWLRRHAELAALAGSIREAREAVDELDRQIDVHRSALVQAVASAGAPTGEPDEPLADLIERAEAVADALAEASSTRKRLSKDVDTLDLERPALEDRAAAARAEWSRWEARWADAMSPLNLPADALTAQAHAVLNKTAELFDRLDKAGALAASLDELDRESARFTRDGLVARRLELAQSAAAAGDTIAEMRGRLAALCREARCPDEDDLPDLEVRSARRQAVEKELADLNARLLELAAGASLDAFLAEADRTDPDGLPPRIDHVNAAIASLERERGEVDQAIGREKAILSLMDGGPKAADAGQEAESLRARIKEDVEQYARLRLASAVLKTGIERYREKVQGPVLARASALFSALTLGSFEGLRVDYDEKDEPVLKGVRPGGREALGVESMSLGTADQLYLALRLAALEVDLDRREPLPLVVDDILIQFDDARAAATLAALAALSRRTQVLVFTHHRHLLDLASSVVPPPDLITHTLPGHRLTA*