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berkeley_reactor_200306_biofilm_scaffold_34499_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(120..1331)

Top 3 Functional Annotations

Value Algorithm Source
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMT5_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 402.0
  • Bit_score: 641
  • Evalue 5.70e-181
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 402.0
  • Bit_score: 641
  • Evalue 1.60e-181
Riboflavin biosynthesis protein RibBA {ECO:0000256|SAAS:SAAS00280052}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 402.0
  • Bit_score: 641
  • Evalue 8.00e-181

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1212
ATGCCTTATTCCCTATCCAAGATCGAAGACGCCCTGGAGGCGATGGCCGCGGGCCGCGTGGTGATCGTCGTCGACGACGAGGACCGCGAGAACGAAGGGGATTTCATCGCCGCGGCCGAGCGGGTCACGCCCGAGGTCATCGAGTTCATGATCACGCACGGGCGCGGGCAGCTCTGCATGCCGATCATGCCCGAACTCGCCGAGCGGCTCGACCTCCGCCCGATGGTCGAACAGAACAACGCCCCGTACAAGACACCGTTCACCGTGCCGGTCGACCACAGGTCGTGTCACACCGGGATCAGCGCCGAGGAGCGGGCCCGGACCGTCCGCGCGATCATCGACCCGGCCACGAAACCGGCCGACCTCGTCCGACCCGGACACCTGTTCCCGCTCGTCGCCAAGGAGGGGGGAGTCCTCCGCCGCGCCGGACACACCGAGGCGACGGTCGACCTCGCGCGCCTCGCCGGGCTCCGGCCCGCGGGGGTGCTCTGCGAGATCCTCGACGGCATCCACGTCGCCAACCGGGAACGCCTGCACGCGATTTCGAGCGAGTTCAACCTGCCGATCATCTCGATCGAGGGACTGATCAACTTCCGCCGCCGCCAGGAGAAGCTGGTCGAGCGCGTCGCCGAGGCCGAACTACCGACCCGGTACGGCCACGGCCGGATCGTCGGCTACCGGGTCAAGAACGAGCCGGGGAACGAGCCGATCGCCGTGGTCATGGGCGACCTGTCGTCGGTCCCCGCGCCGCTCGTCCGGATGCACTCGTCGTGCTTCACGGGCGACCTGCTCGAATCGCTCCGCTGCGACTGCGGCGATCAGCTCCATCTAGCCCTGGAAATGATCGGCCGCGAAGGGGTGGGGGCGCTGATCTACCTGCCCCAAGAGGGGCGCGGCATCGGGCTGATCGAGAAACTGCGGGCGTACGCGCTCCAGGACACGGGGCTCGACACGGTCGAGGCCAACCTCGCGCTCGGCTACCGGGCCGACGAGCGGGACTACGGCCCCGGCCTCCAGATCCTCAAGGACCTCGGCCTGACCAAGGTCCGCCTGCTCACGAACAACCCGAAGAAGGCCGACGCCTTCGTGATCCACGGGCACGGCCTGGAGGTCGTGGACCAGGTCCCCATCATCGCCCCCGACGAGTCCGACCGCCGCAAATACATGGCCGCCAAGCGCGACAAGATGGGGCACCTGCTCCCCGCCGACTAG
PROTEIN sequence
Length: 404
MPYSLSKIEDALEAMAAGRVVIVVDDEDRENEGDFIAAAERVTPEVIEFMITHGRGQLCMPIMPELAERLDLRPMVEQNNAPYKTPFTVPVDHRSCHTGISAEERARTVRAIIDPATKPADLVRPGHLFPLVAKEGGVLRRAGHTEATVDLARLAGLRPAGVLCEILDGIHVANRERLHAISSEFNLPIISIEGLINFRRRQEKLVERVAEAELPTRYGHGRIVGYRVKNEPGNEPIAVVMGDLSSVPAPLVRMHSSCFTGDLLESLRCDCGDQLHLALEMIGREGVGALIYLPQEGRGIGLIEKLRAYALQDTGLDTVEANLALGYRADERDYGPGLQILKDLGLTKVRLLTNNPKKADAFVIHGHGLEVVDQVPIIAPDESDRRKYMAAKRDKMGHLLPAD*