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2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

In projects: 2019_SCN_bioreactor_200211_biofilm  |  SCN_92

Consensus taxonomy: Singulisphaera acidiphila  →  Singulisphaera  →  Planctomycetales  →  Planctomycetia  →  Planctomycetes  →  Bacteria

Displaying items 251-300 of 525 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
berkeley_reactor_200306_biofilm_scaffold_159207
Species: Singulisphaera acidiphila (83.33%)
6 8951 bp 67.58 8.63 95.45
berkeley_reactor_200306_biofilm_scaffold_9913
Species: Singulisphaera acidiphila (83.33%)
6 7503 bp 70.60 8.82 90.75
berkeley_reactor_200306_biofilm_scaffold_112783
Species: Singulisphaera acidiphila (83.33%)
6 5792 bp 69.06 9.66 86.55
berkeley_reactor_200306_biofilm_scaffold_117069
Species: Singulisphaera acidiphila (100%)
6 7502 bp 68.20 8.24 89.26
berkeley_reactor_200306_biofilm_scaffold_139357
Species: Singulisphaera acidiphila (50%)
6 3831 bp 70.63 8.46 91.86
berkeley_reactor_200306_biofilm_scaffold_52615
Species: Singulisphaera acidiphila (83.33%)
6 6405 bp 68.27 8.34 94.66
berkeley_reactor_200306_biofilm_scaffold_21194
Species: Singulisphaera acidiphila (66.67%)
6 5154 bp 68.06 9.20 89.29
berkeley_reactor_200306_biofilm_scaffold_125439
Species: Singulisphaera acidiphila (100%)
6 7998 bp 69.50 8.59 94.22
berkeley_reactor_200306_biofilm_scaffold_54136
Species: Singulisphaera acidiphila (83.33%)
6 7579 bp 68.10 8.27 92.70
berkeley_reactor_200306_biofilm_scaffold_18920
Species: Singulisphaera acidiphila (66.67%)
6 4913 bp 65.13 6.87 69.79
berkeley_reactor_200306_biofilm_scaffold_130063
Species: Singulisphaera acidiphila (100%)
6 6770 bp 66.79 7.89 85.39
berkeley_reactor_200306_biofilm_scaffold_97177
Species: Singulisphaera acidiphila (50%)
6 7247 bp 69.06 8.03 83.91
berkeley_reactor_200306_biofilm_scaffold_108414
Species: Singulisphaera acidiphila (66.67%)
6 8050 bp 67.69 7.47 91.53
berkeley_reactor_200306_biofilm_scaffold_122567
Species: Singulisphaera acidiphila (100%)
6 10409 bp 67.64 8.34 91.39
berkeley_reactor_200306_biofilm_scaffold_1209
Species: Singulisphaera acidiphila (100%)
6 8968 bp 66.93 8.43 90.29
berkeley_reactor_200306_biofilm_scaffold_21512
Species: Singulisphaera acidiphila (66.67%)
6 6031 bp 71.18 8.28 87.35
berkeley_reactor_200306_biofilm_scaffold_56896
Species: Singulisphaera acidiphila (66.67%)
6 9050 bp 71.08 7.76 89.54
berkeley_reactor_200306_biofilm_scaffold_70439
Species: Singulisphaera acidiphila (83.33%)
6 8327 bp 68.55 8.57 89.17
berkeley_reactor_200306_biofilm_scaffold_24091
Species: Singulisphaera acidiphila (66.67%)
6 6742 bp 70.65 7.28 90.28
berkeley_reactor_200306_biofilm_scaffold_94387
Species: Singulisphaera acidiphila (83.33%)
6 8790 bp 69.25 7.78 83.14
berkeley_reactor_200306_biofilm_scaffold_116043
Species: Singulisphaera acidiphila (80%)
5 4875 bp 64.55 8.03 76.31
berkeley_reactor_200306_biofilm_scaffold_26624
Species: Singulisphaera acidiphila (80%)
5 4052 bp 70.85 7.14 91.14
berkeley_reactor_200306_biofilm_scaffold_139833
Species: Singulisphaera acidiphila (60%)
5 5499 bp 66.87 8.65 90.89
berkeley_reactor_200306_biofilm_scaffold_149292
Species: Singulisphaera acidiphila (80%)
5 6869 bp 66.31 7.95 84.95
berkeley_reactor_200306_biofilm_scaffold_16196
Species: Singulisphaera acidiphila (100%)
5 6830 bp 67.82 8.35 91.23
berkeley_reactor_200306_biofilm_scaffold_91735
Species: Singulisphaera acidiphila (60%)
5 10231 bp 67.56 8.06 93.51
berkeley_reactor_200306_biofilm_scaffold_5708
Species: Singulisphaera acidiphila (100%)
5 3770 bp 64.75 7.32 72.18
berkeley_reactor_200306_biofilm_scaffold_161573
Species: Singulisphaera acidiphila (100%)
5 3561 bp 69.53 7.03 82.06
berkeley_reactor_200306_biofilm_scaffold_125927
Species: Singulisphaera acidiphila (100%)
5 7580 bp 68.98 7.70 94.43
berkeley_reactor_200306_biofilm_scaffold_108860
Species: Singulisphaera acidiphila (100%)
5 6261 bp 65.55 7.28 77.00
berkeley_reactor_200306_biofilm_scaffold_90522
Species: Singulisphaera acidiphila (60%)
5 4637 bp 70.80 7.50 88.31
berkeley_reactor_200306_biofilm_scaffold_28480
Species: Singulisphaera acidiphila (80%)
5 4427 bp 71.85 7.52 83.49
berkeley_reactor_200306_biofilm_scaffold_100413
Species: Singulisphaera acidiphila (100%)
5 5274 bp 71.69 8.45 95.62
berkeley_reactor_200306_biofilm_scaffold_4030
Species: Singulisphaera acidiphila (100%)
5 7647 bp 68.97 9.51 84.27
berkeley_reactor_200306_biofilm_scaffold_29751
Species: Singulisphaera acidiphila (60%)
5 4970 bp 71.21 7.55 88.31
berkeley_reactor_200306_biofilm_scaffold_52007
Species: Singulisphaera acidiphila (60%)
5 3362 bp 70.94 6.96 77.10
berkeley_reactor_200306_biofilm_scaffold_119362
Species: Singulisphaera acidiphila (80%)
5 7996 bp 70.09 9.60 86.29
berkeley_reactor_200306_biofilm_scaffold_129312
Species: Singulisphaera acidiphila (100%)
5 4890 bp 70.65 7.33 93.50
berkeley_reactor_200306_biofilm_scaffold_92135
Species: Singulisphaera acidiphila (80%)
5 11207 bp 64.72 8.53 91.47
berkeley_reactor_200306_biofilm_scaffold_16593
Species: Singulisphaera acidiphila (80%)
5 3714 bp 66.48 11.07 85.70
berkeley_reactor_200306_biofilm_scaffold_9726
Species: Singulisphaera acidiphila (100%)
5 7001 bp 67.30 8.03 91.66
berkeley_reactor_200306_biofilm_scaffold_95256
Species: Singulisphaera acidiphila (60%)
5 6545 bp 72.50 8.50 85.81
berkeley_reactor_200306_biofilm_scaffold_103534
Species: Singulisphaera acidiphila (100%)
5 6845 bp 63.37 8.48 95.02
berkeley_reactor_200306_biofilm_scaffold_61392
Species: Singulisphaera acidiphila (60%)
5 5819 bp 72.40 7.78 97.28
berkeley_reactor_200306_biofilm_scaffold_28327
Species: Singulisphaera acidiphila (100%)
5 7093 bp 70.80 8.21 97.70
berkeley_reactor_200306_biofilm_scaffold_39744
Species: Singulisphaera acidiphila (100%)
5 5047 bp 71.90 8.02 88.81
berkeley_reactor_200306_biofilm_scaffold_144237
Species: Singulisphaera acidiphila (80%)
5 3495 bp 68.76 7.98 88.58
berkeley_reactor_200306_biofilm_scaffold_111190
Species: Singulisphaera acidiphila (80%)
5 6429 bp 68.33 7.79 80.40
berkeley_reactor_200306_biofilm_scaffold_147305
Species: Singulisphaera acidiphila (60%)
5 6482 bp 69.08 8.01 79.61
berkeley_reactor_200306_biofilm_scaffold_136602
Species: Singulisphaera acidiphila (80%)
5 9060 bp 69.43 8.34 87.98
Displaying items 251-300 of 525 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.