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cn_combo_scaffold_12915_10

Organism: CN-SCN_Phenylobacterium_14x

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38
Location: comp(5298..5663)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0F4A similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 119.0
  • Bit_score: 180
  • Evalue 1.10e-42
Helix-turn-helix protein {ECO:0000313|EMBL:KHS42600.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 121.0
  • Bit_score: 180
  • Evalue 1.50e-42
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 119.0
  • Bit_score: 179
  • Evalue 6.80e-43

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGCCCGCCGATGTCGTCAGGGCCGAGGTGGGCACCCATCGCTCGTCGATCAGCATCGGCGAGCTGGTGGCGCTGAAGCGGCGGTTCGGGGTCAGCGTTCAGGCGATCGCCTTCCGCTGCAAGGATCTCGGCATCATCGACGCCAAGGCCTTCTCTGATCTCTATCGCGAGTTCAAACGGCGGGGCTGGCGCGATCCGCCGTTTGAAGAGCCGGCGGTCATGCTGGCCGAGGAGGAAGAGCCGAAGCGCTTTGAGCGCCTGTGTCTGCGGGCGCTGGCGGAGAATGTGATCGGCGAGAGCCGTGCGGCCGAGATGCTGGGCATCTCCATGCGCGATCTCGACGCCCGCCTGGAACAGGCGGCGTGA
PROTEIN sequence
Length: 122
MPADVVRAEVGTHRSSISIGELVALKRRFGVSVQAIAFRCKDLGIIDAKAFSDLYREFKRRGWRDPPFEEPAVMLAEEEEPKRFERLCLRALAENVIGESRAAEMLGISMRDLDARLEQAA*