ggKbase home page

cn_combo_scaffold_188

Alias: PHE30_58

Search features with annotation key words

Displaying items 91-120 of 230 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_188_91
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90425..91345
DNA (921bp) protein (307aa)
Putative nickel transport system permease protein NikB n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q7A4_BREDI
Putative nickel transport system permease protein NikB {ECO:0000313|EMBL:EKY23502.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundim
nickel ABC transporter permease
cn_combo_scaffold_188_92
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91342..92151
DNA (810bp) protein (270aa)
ABC transporter, permease protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q6G0_BREDI
ABC transporter, permease protein {ECO:0000313|EMBL:EKY23501.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevu
binding-protein-dependent transport system inner membrane protein
cn_combo_scaffold_188_93
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92148..92951
DNA (804bp) protein (268aa)
ABC transporter, ATP-binding protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q6Z7_BREDI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY23500.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Br
putative oligopeptide ABC transporter, ATP-binding protein
cn_combo_scaffold_188_94
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92948..93823
DNA (876bp) protein (292aa)
ABC-type transporter, ATPase subunit (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q685_BREDI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY23499.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Br
cn_combo_scaffold_188_95
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93823..95361
DNA (1539bp) protein (513aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q6B6_BREDI
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EKY23498.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimon
dipeptide ABC transporter substrate-binding protein
cn_combo_scaffold_188_96
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95471..96688
DNA (1218bp) protein (406aa)
MFS transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B30554
Major facilitator superfamily transporter {ECO:0000313|EMBL:KCZ87912.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="H
major facilitator superfamily transporter
cn_combo_scaffold_188_97
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96828..97481
DNA (654bp) protein (218aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R889_PHEZH
CarD family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
CarD family transcriptional regulator rbh
cn_combo_scaffold_188_98
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97552..98421
DNA (870bp) protein (290aa)
Universal stress protein UspA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R890_PHEZH
universal stress protein UspA Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
universal stress protein UspA
cn_combo_scaffold_188_99
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98439..98798
DNA (360bp) protein (120aa)
Cytochrome c family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R891_PHEZH
cytochrome c family protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cytochrome c family protein
cn_combo_scaffold_188_100
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98820..99668
DNA (849bp) protein (283aa)
Universal stress protein UspA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R892_PHEZH
universal stress protein UspA Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
universal stress protein UspA rbh
cn_combo_scaffold_188_101
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99797..101242
DNA (1446bp) protein (482aa)
fixL; sensory box histidine kinase FixL; K14986 two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Sensory box histidine kinase FixL n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R894_PHEZH
fixL; sensory box histidine kinase FixL rbh
cn_combo_scaffold_188_102
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101235..101843
DNA (609bp) protein (203aa)
Response regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R895_PHEZH
response regulator; K14987 two-component system, LuxR family, response regulator FixJ Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
response regulator
cn_combo_scaffold_188_103
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101924..102310
DNA (387bp) protein (129aa)
Response regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R896_PHEZH
response regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
response regulator
cn_combo_scaffold_188_104
unknown

Not on your lists

comp(102402..102506)
DNA (105bp) protein (35aa)

This feature has no annotations

cn_combo_scaffold_188_105
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102577..103962)
DNA (1386bp) protein (462aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Cau
Coproporphyrinogen-III oxidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R897_PHEZH
hemN; oxygen-independent coproporphyrinogen III oxidase
cn_combo_scaffold_188_106
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104031..104189)
DNA (159bp) protein (53aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R898_PHEZH
cbb3-type cytochrome oxidase maturation protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cbb3-type cytochrome oxidase maturation protein
cn_combo_scaffold_188_107
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104177..106354)
DNA (2178bp) protein (726aa)
cation-transporting ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Cation-transporting ATPase, E1-E2 family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R899_PHEZH
cation-transporting ATPase
cn_combo_scaffold_188_108
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106345..106836)
DNA (492bp) protein (164aa)
Ferredoxin n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8A0_PHEZH
ferredoxin Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ferredoxin
cn_combo_scaffold_188_109
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106833..108329)
DNA (1497bp) protein (499aa)
Polyferredoxin n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8A1_PHEZH
polyferredoxin Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
polyferredoxin
cn_combo_scaffold_188_110
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108326..109270)
DNA (945bp) protein (315aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8A2_PHEZH
ccoP; cytochrome c oxidase, CcoP subunit; K00406 cytochrome c oxidase cbb3-type subunit III Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ccoP; cytochrome c oxidase, CcoP subunit rbh
cn_combo_scaffold_188_111
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109263..109430)
DNA (168bp) protein (56aa)
Cytochrome c oxidase, CcoQ subunit n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8A3_PHEZH
cytochrome c oxidase, CcoQ subunit
Cytochrome c oxidase, CcoQ subunit {ECO:0000313|EMBL:ACG79221.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Ph
cn_combo_scaffold_188_112
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109427..110164)
DNA (738bp) protein (246aa)
Cytochrome c oxidase, CcoO subunit n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8A4_PHEZH
ccoO; cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ccoO; cbb3-type cytochrome c oxidase subunit II rbh
cn_combo_scaffold_188_113
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110175..111839)
DNA (1665bp) protein (555aa)
ccoN; cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Cytochrome c oxidase, CcoN subunit n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8A5_PHEZH
ccoN; cbb3-type cytochrome c oxidase subunit I rbh
cn_combo_scaffold_188_114
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111936..112148
DNA (213bp) protein (71aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_188_115
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112322..112975
DNA (654bp) protein (218aa)
Outer membrane protein OmpW n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8A9_PHEZH
outer membrane protein OmpW; K07275 outer membrane protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
outer membrane protein OmpW
cn_combo_scaffold_188_116
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113063..113491
DNA (429bp) protein (143aa)
Sensor histidine kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REH3_PHEZH
Signal transduction histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
sensor histidine kinase
cn_combo_scaffold_188_117
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113458..114021)
DNA (564bp) protein (188aa)
molybdopterin-guanine dinucleotide biosynthesis protein A n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037E86E5
Molybdopterin-guanine dinucleotide biosynthesis protein A {ECO:0000313|EMBL:EJL28263.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulob
hypothetical protein
cn_combo_scaffold_188_118
unknown

Not on your lists

comp(114078..114347)
DNA (270bp) protein (90aa)

This feature has no annotations

cn_combo_scaffold_188_119
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114490..115269)
DNA (780bp) protein (260aa)
Ion transport protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGJ8_PHEZH
Ion transport protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Ion transport protein rbh
cn_combo_scaffold_188_120
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115388..115570
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGJ9_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:KFC69749.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
Displaying items 91-120 of 230 in total

View Taxonomy