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cn_combo_scaffold_1555

Alias: PHE30_37

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1555_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..715
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036BA95D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK47125.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="
cn_combo_scaffold_1555_2
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

928..1680
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003634D5C
Autoinducer 2 import system permease protein lsrC AI-2 {ECO:0000313|EMBL:KEC78754.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ens
rbsC5; ribose transport system permease RbsC
cn_combo_scaffold_1555_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1793..3193
DNA (1401bp) protein (467aa)
Sensor histidine kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ5_PHEZH
sensor histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
sensor histidine kinase rbh
cn_combo_scaffold_1555_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3266..6205
DNA (2940bp) protein (980aa)
glutamate-ammonia-ligase adenylyltransferase; K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ4_PHEZH
glutamate-ammonia-ligase adenylyltransferase
cn_combo_scaffold_1555_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6341..6766
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ3_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1555_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6799..7341
DNA (543bp) protein (181aa)
RNA polymerase sigma factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ2_PHEZH
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
RNA polymerase sigma factor
cn_combo_scaffold_1555_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7343..7783
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ1_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1555_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7780..8286
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ0_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1555_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8283..10130)
DNA (1848bp) protein (616aa)
sensor histidine kinase; K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Sensor histidine kinase (Non-motile and phage-resistance protein ) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHP9_PHEZH
sensor histidine kinase
cn_combo_scaffold_1555_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10228..12852)
DNA (2625bp) protein (875aa)
pepN; aminopeptidase; K01256 aminopeptidase N [EC:3.4.11.2] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Aminopeptidase N n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHP8_PHEZH
pepN; aminopeptidase
cn_combo_scaffold_1555_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13039..14259
DNA (1221bp) protein (407aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9H5_PHEZH
L-carnitine dehydratase/bile acid-inducible protein F; K14470 mesaconyl-CoA C1-C4 CoA transferase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
L-carnitine dehydratase/bile acid-inducible protein F
cn_combo_scaffold_1555_12
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14452..14808
DNA (357bp) protein (119aa)
ArsR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGM6_9RHIZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESX68215.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
transcriptional regulator
cn_combo_scaffold_1555_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14805..15272
DNA (468bp) protein (156aa)
Activator of HSP90 ATPase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFP4_9RHIZ
Activator of HSP90 ATPase {ECO:0000313|EMBL:ESX68214.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
hypothetical protein
cn_combo_scaffold_1555_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15459..15752
DNA (294bp) protein (98aa)
50S ribosomal protein L28 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RL28_PHEZH
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
rpmB; 50S ribosomal protein L28
cn_combo_scaffold_1555_15
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15805..16809)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFQ6_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_1555_16
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16806..18758)
DNA (1953bp) protein (651aa)
cobalamin biosynthesis protein; K09883 cobaltochelatase CobT [EC:6.6.1.2] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Cobalamin biosynthesis protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFQ7_PHEZH
cobalamin biosynthesis protein
cn_combo_scaffold_1555_17
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18878..19057
DNA (180bp) protein (60aa)
UPF0391 membrane protein PHZ_c0725 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFQ8_PHEZH
transmembrane protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
transmembrane protein
cn_combo_scaffold_1555_18
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19207..21360
DNA (2154bp) protein (718aa)
TonB-dependent siderophore receptor, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISD6_RHOCS
TonB-dependent siderophore receptor, putative rbh
TonB-dependent siderophore receptor, putative {ECO:0000313|EMBL:ACI98372.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;"
cn_combo_scaffold_1555_19
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21367..22590
DNA (1224bp) protein (408aa)
PepSY-associated membrane protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISD7_RHOCS
PepSY-associated membrane protein rbh
PepSY-associated membrane protein {ECO:0000313|EMBL:ACI98373.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rho
cn_combo_scaffold_1555_20
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22611..23831)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFQ9_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein rbh
cn_combo_scaffold_1555_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23999..26539
DNA (2541bp) protein (847aa)
quiA; quinate/shikimate dehydrogenase (EC:1.1.5.8) Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
PQQ dehydrogenase family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N3C8_9RHIZ
Membrane-bound PQQ-dependent dehydrogenase
cn_combo_scaffold_1555_22
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26624..26971
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KHM7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB32798.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
hypothetical protein
cn_combo_scaffold_1555_23
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26976..28469)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003748A7F
Uncharacterized protein {ECO:0000313|EMBL:ELR66468.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK1
major facilitator transporter
cn_combo_scaffold_1555_24
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28604..29203
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI00034661FA
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AIJ13688.1}; TaxID=457428 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans
cn_combo_scaffold_1555_25
unknown

Not on your lists

comp(29246..29674)
DNA (429bp) protein (143aa)

This feature has no annotations

cn_combo_scaffold_1555_26
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29671..32256)
DNA (2586bp) protein (862aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HHA1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KJS04326.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
TonB-dependent receptor
cn_combo_scaffold_1555_27
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32436..33326
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EGC8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ59817.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
cn_combo_scaffold_1555_28
unknown

Not on your lists

33580..34005
DNA (426bp) protein (142aa)

This feature has no annotations

Displaying 28 items

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