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cn_combo_scaffold_1353_26

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: 28235..29158

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GR81_CUPNN similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 304.0
  • Bit_score: 227
  • Evalue 2.00e-56
DNA-binding transcriptional activator GcvA; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 309.0
  • Bit_score: 249
  • Evalue 6.80e-63
glycine cleavage system transcriptional activator GcvA similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 303.0
  • Bit_score: 237
  • Evalue 4.10e-60

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGAAGCGACTTCCCCCGCTCACCGCGCTCCGGGCGTTCGAGGCCGTCGGACGCCTCGGCCATGTCAAGGAGGCGGCCGACGAACTCAACGTGACTCCGGCGGCGGTCAGCCACCAGATCCGGGCGCTGGAAGAACACCTCGAGGTCGAGCTGTTCTCGCGCTCGACCCGGAACCTCCAGCTCACGCGCTGCGGGTCCGACTTCCTGTCGGCGGTGAGCGGGGCCTTCGAAATGCTGAAGGAGGGCGCCGACCGCCTCTCGCGCGAGACGGGGCGTCAGCGACTGGTGGTCAACAGCCTGCCCACCTTCGCCAGCAACTTCCTGGTGCCCCGCCTGCTCCAGTTCCACAACGCCCATCCCGACCTCGAGATGGAGATCAACACCAGCGTCCGCTTCGGCGATCCGGGCGAGCTCAAGAACGTCGGCGCCGACATCGCCATCCGCGCGGGCCTGCACGAGGGCGCCTGGCCCGGCATGGTGGCCGAACGCCTGGTGCCGGAGGTCATGTTCCCGGTCTGCGCGCCAGGGCTGCTTCAGGCCAGCGGCCCCCTGGCCTCGCCGGCCGACCTGGCGAGCCAGACCCTGCTGATCGTCTCCCGTACGCCCGAAGGCTGGCCCGACTGGCTGGATGCGGCCCGAAGCCAGGGACTGGACACGACGGGCGTGGATTCGAACCATGGCCTGCGGTTCGACACCATCCAACTGGCCATGACCGCGGCCATCGAGGGGCTGGGCGTGGTGATCGGCCGCCGCCCGCTGGTGGACGCCTACCTGGACTCGGGACTTCTGGTCGCGCCGTTCGACCTCGAGATCACCAGCAAGATCGCCTATTGGCTGGTCTATCCGCCGCGCATGGCCCAGACCGAACGCCTGCGCGCCTTCCGCGACTGGCTGCGGACGGAACTCAGCCTGCCGCAGACCTAG
PROTEIN sequence
Length: 308
MKRLPPLTALRAFEAVGRLGHVKEAADELNVTPAAVSHQIRALEEHLEVELFSRSTRNLQLTRCGSDFLSAVSGAFEMLKEGADRLSRETGRQRLVVNSLPTFASNFLVPRLLQFHNAHPDLEMEINTSVRFGDPGELKNVGADIAIRAGLHEGAWPGMVAERLVPEVMFPVCAPGLLQASGPLASPADLASQTLLIVSRTPEGWPDWLDAARSQGLDTTGVDSNHGLRFDTIQLAMTAAIEGLGVVIGRRPLVDAYLDSGLLVAPFDLEITSKIAYWLVYPPRMAQTERLRAFRDWLRTELSLPQT*