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cn_combo_scaffold_43_60

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: 82386..83000

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 factor n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE79_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 199.0
  • Bit_score: 139
  • Evalue 3.60e-30
RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EAQ28066.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythr similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 199.0
  • Bit_score: 138
  • Evalue 1.50e-29
RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 183.0
  • Bit_score: 130
  • Evalue 6.10e-28

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Taxonomy

Erythrobacter sp. NAP1 → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGGGATCGCGGCCACGAGATCCGGGCGTCACCTTGCAGACCGATAGCTTCACGACCGACCTGATCCGGCTGATCCCGGAGATGCGCCGACGGGCGATGTTCCTGACGCGCCACGCCGACCATGCGGACGACCTGCTCCAGGGCGCCCTGCTGCGGGCGCTGCGCAATCGCGACCGTTTCGAGCCGGGTTCGAACCTGCGGGCGTGGTTCAGCGTCATCCTGCGGCACGAGATGACCGACCGTTGGCGATCCACCCGGCGCGAGGTGGCCTACGACCAGGATCGCGACATCCGCTTCGTGGAGCCTGAGCAGGAGAATCAGGCCCGGCTGAGCGACTTGCATCTGGCCCTGCAGGCCCTGGCGCCCGAGAAGCGGCAGGCCCTGCTCGCCATCGCGGTGGCGGGCCTGGCCTACGAAGAGGCGGCCGATCGCATCGGCTGTTCGTCCGGAACGCTGAAGAGCCGGGTGTCACGGGCGCGCCGGGAACTGCAGGACATGCTGGAGACGGGGCGGCTTTCCAAGTCGGCGAGGCGGCCGAGACACGCCGCCACGTCGATCGAGCGCGCCGCCGGGATCGTCGCGGAAGGACGCCGCCGCGACATGGCCGCCGCCTGA
PROTEIN sequence
Length: 205
VGSRPRDPGVTLQTDSFTTDLIRLIPEMRRRAMFLTRHADHADDLLQGALLRALRNRDRFEPGSNLRAWFSVILRHEMTDRWRSTRREVAYDQDRDIRFVEPEQENQARLSDLHLALQALAPEKRQALLAIAVAGLAYEEAADRIGCSSGTLKSRVSRARRELQDMLETGRLSKSARRPRHAATSIERAAGIVAEGRRRDMAAA*