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cn_combo_scaffold_85_275

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: comp(278116..278673)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH46_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 186.0
  • Bit_score: 292
  • Evalue 3.90e-76
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 185.0
  • Bit_score: 335
  • Evalue 5.70e-89
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 186.0
  • Bit_score: 290
  • Evalue 2.50e-76

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Taxonomy

R_Phenylobacterium_69_31 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
TTGGCCGCCGCCGTCACGTCCCCGGACATACTCGTCCAGCTCATGTCGCGCATCGCCGCCGGCGAACGCGAGGCCCTGCGACAACTTTACGAAGCCACCTCGGCGAAACTCTTTGGCGTCTGCCTCCGTATCCTCTCCGACCGCGAGGAAAGTGAGGACGTGTTGCAGGACGTTTACGTCACCATCTGGCGACGTGCGGATCGGTTCGATTCCGCCCGGGCGAGCGTGATGACATGGGCATCGACCATCGCCCGCAACCGGGCGATTGATCGCCTGCGCGCCCGAGGTCCGATCGCCTACGCCGAACCGGTCGAGGAGCTGGAGATTCCCGATGGGGCCGACAGCGCCGAGACCCTGCTCTCGGCCGCCGACGACCGCGCCCGGCTGCACGGCTGCCTGAGCGAGCTGGACGACCGCACCCAGTCGGTCATCCGCACCGCCTTCTTCGAGGGCGTGACCTATGACGCGCTGGCCCGCCGGATGGATGCGCCGCTGGGCACGGTGAAGAGCTGGATTCGTCGGGGACTGGCGAAGCTGAAGGGGTGCCTCCAGTCATGA
PROTEIN sequence
Length: 186
LAAAVTSPDILVQLMSRIAAGEREALRQLYEATSAKLFGVCLRILSDREESEDVLQDVYVTIWRRADRFDSARASVMTWASTIARNRAIDRLRARGPIAYAEPVEELEIPDGADSAETLLSAADDRARLHGCLSELDDRTQSVIRTAFFEGVTYDALARRMDAPLGTVKSWIRRGLAKLKGCLQS*