ggKbase home page

cn_combo_scaffold_189_115

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: 115714..116259

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF73_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 165.0
  • Bit_score: 170
  • Evalue 2.20e-39
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 180.0
  • Bit_score: 247
  • Evalue 1.50e-62
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 165.0
  • Bit_score: 170
  • Evalue 6.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Phenylobacterium_69_31 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
TTGGCGGCGCCGCGGTCCACCGAGCGGGTTGATGACGAAGGACCGCTCTACAGGGCGTTCCTGGAGAAGCGCGAAGCGCTGCTCCTGTTTCTGGCCGCCCGCACGCGTTGCATGGCGACCGCCGAGGACCTCCTCCAGGACCTCTATCTGAAACTCCACGGTCTCGACGACGAGGCGGCGGTTCGCGCCCCGGCAGGCCTGCTCTACCGCATGGCGACGAACGTCCTGGTGGATCATGTGCGAAGCCGTGACCGTTCGGCCCGGCGCGACGCCAGCTGGCGGCAGGAGACGCGGTCCACGCTCGCCGGCGAGGACGTCGCGGAAGAGGCCGCGGCGGATGAAGCGCTGATCGCCCAGGAACGTGTTCGCCTGCTGGCGGAGGCGGTGGCCGAGTTGCCGCCGCAGATGGGCCGCGCCTTCCGGCTGCACAAACTGAAGGGCCTGACCCAGGCTCAGACGGCCCAGGCCATGGGCGTCTCGGTGAAGATGGTCGAGCAGCACATCCAGGCCGCCGTTCGCAACCTCACCCGCAGGTTGCGGCCATGA
PROTEIN sequence
Length: 182
LAAPRSTERVDDEGPLYRAFLEKREALLLFLAARTRCMATAEDLLQDLYLKLHGLDDEAAVRAPAGLLYRMATNVLVDHVRSRDRSARRDASWRQETRSTLAGEDVAEEAAADEALIAQERVRLLAEAVAELPPQMGRAFRLHKLKGLTQAQTAQAMGVSVKMVEQHIQAAVRNLTRRLRP*