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cn_combo_scaffold_532_12

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: 15503..16015

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Caulobacter sp. AP07 RepID=J3AUC1_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 163.0
  • Bit_score: 163
  • Evalue 1.90e-37
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL38066.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 163.0
  • Bit_score: 162
  • Evalue 6.00e-37
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 164.0
  • Bit_score: 155
  • Evalue 1.90e-35

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Taxonomy

Caulobacter sp. AP07 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
GTGCAACCCGACGCCAAGGCGGCCGCCAGCGCGATGAGCCAACGGTTTCGACCGGCTCTCATCGCATTCTTCCTGCGGCGGATCCGTAACCATTCGGAGGCGGAAGACCTGACCCAGGAAGTGCTCTTGCGGGTCGCTCAGAGAGGCGCCGAGATCGATGCGGCCCGTCCCGACGCCTATGTGTTCCAGATCGCGGCCAACCTGCTGCGCGACCGCGGCCGCCGCCAGAAGGTGCGTGCGGCCTACCAGGCGGCCCTGGCCTCGAACGACGCGGCCTGGGTCGAGGAGCGTGACCCCGATCGGGTGCTCCAGGCCAAGCAGTCGCTGTCGACCGTGCTCGGCGCGCTTCAGGAACTGCCCGACCGGACGCGCACCATCTTCGTCCTCTTCCGCCTTGAGAACATGAAGCAGCGCGAGATCGCCGACATGCTCGGAATCTCGGTGCGCACCGTGGAGCAGCACGTGGTGCGCGCCAGCGTGCATCTGCGCGCCTGCTTCGGGAGCCAGCCGTGA
PROTEIN sequence
Length: 171
VQPDAKAAASAMSQRFRPALIAFFLRRIRNHSEAEDLTQEVLLRVAQRGAEIDAARPDAYVFQIAANLLRDRGRRQKVRAAYQAALASNDAAWVEERDPDRVLQAKQSLSTVLGALQELPDRTRTIFVLFRLENMKQREIADMLGISVRTVEQHVVRASVHLRACFGSQP*