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cn_combo_scaffold_2323_16

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: comp(12468..13049)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor cnrH n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QFW6_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 183.0
  • Bit_score: 244
  • Evalue 9.80e-62
RNA polymerase sigma factor cnrH {ECO:0000313|EMBL:EGF93777.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticca similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 183.0
  • Bit_score: 244
  • Evalue 1.40e-61
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 180.0
  • Bit_score: 230
  • Evalue 5.40e-58

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Taxonomy

Asticcacaulis biprosthecium → Asticcacaulis → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
GTGGACGCCGAGGCGTCCGACAACATCCTCGCCCGATCAGCCGCGGCTGGGGATGATCGGGCCTTCGCCGTGCTCGTTCGTCGCCACAAGGATGGCCTCTATCGCCTGCTGCGCCGCTACACCGGGGACGCCGACGAAGCCTATGAGGCCGTCCACGAGGCTTTCATCGCCGCCTGGAGCGCGCTGAAGCGCTACGATCCGCAACGTCCGTTCGGTGCCTGGCTGCGCACGATCGCGATCAACAAAGCGCGCGACCGCGGCCGTCGAATGGTGGTCCGCCGCGTGATCTTCGGATCGGGCGGCCTTGAGGACAGCGAGGCATTGAACGCGCCGGACCCGTCGCCCAGCGCCGAGGCCGGCGTTTTGGATGACGAGCAGGCCATGCGGCTGGACCGCGCCGTCGCGCGGCTGCCGGCCGCCCTGAAGGAGCCGCTGCTGCTGACCGCCTTCGAAGGCCTGAGCCAGCAGGACGCCGCACAGATCCTCGGCGTCTCGATCAAGACCATCGAGACCCGCGTCTACCGCGCCCGCAAGCTGCTGGCCGAGCAGCTCGATACCGACATGCGGCCTTCGGCTAGGTGA
PROTEIN sequence
Length: 194
VDAEASDNILARSAAAGDDRAFAVLVRRHKDGLYRLLRRYTGDADEAYEAVHEAFIAAWSALKRYDPQRPFGAWLRTIAINKARDRGRRMVVRRVIFGSGGLEDSEALNAPDPSPSAEAGVLDDEQAMRLDRAVARLPAALKEPLLLTAFEGLSQQDAAQILGVSIKTIETRVYRARKLLAEQLDTDMRPSAR*