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cn_combo_scaffold_4452_1

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: 1..3621

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 999.99
  • Bit_score: 2303
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RPOB_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 999.99
  • Bit_score: 2288
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 999.99
  • Bit_score: 2288
  • Evalue 0.0

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Taxonomy

R_Phenylobacterium_69_31 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3621
ATCGTCTCGCAGATGCACCGCTCGCCGGGCGTCTTCTTCGACCACGACAAGGGCAAGACCCACGCCTCGGGCAAGCTGCTGTTCGCCGCCCGCGTCATCCCCTATCGCGGCTCGTGGCTGGACTTCGAGTTCGACGCCAAGGACATCGTCTACGTCCGCATCGACCGCCGCCGGAAGCTGCCGGCGACCACCTTCCTGATGGCGCTCGGCATGGACGGCGAGGAGATCCTCTCGACGTTCTACGAGACCGTCCCCTACGAGAAGAAGAAGGGCGGCTGGGCCACCCCGTACAAGGCCGAGCGCTGGCGCGGGGTGAAGCCCGAGTTCCCGCTGATCGACGCCGACAGCGGCGAGGAGATCGCTCCGGCCGGCCAGAAGATCTCGGCCCGCAACGCCAAGAAGTTCGCCGACAACGGCCTCAAGACGCTGCTGCTCGCGCCTGAGGCCCTGAACGGCCGCTACCTGGCGCGCGATCTGGTGAATTTCGAGACCGGCGAGATCTACGCCGAGGCCGGCGACGAGCTGGATGCCGGCCTTCTGGCCAGCCTGGAAGAGCAGGGCTTCAACACCCTGGACGTCCTGGACATCGACCACGTCACCGTGGGCGCCTACGTCCGCAACACCCTCCGGATCGACAAGAACACCGTCCGCGAGGACGCGCTGTTCGACGTCTATCGCGTCATGCGTCCGGGCGAGCCGCCGACGGTGGAAGCCGCCGAGGCCATGTTCAAGTCGCTCTTCTTCGATTCCGAGCGCTACGACCTGTCTTCGGTCGGCCGCGTGAAGATGAACATGCGCCTGGAGCTCGATTGCCCCGACGATGTCCGCATCCTGCGCAAGGAAGACGTCCTGGCGGTGCTGGAGACCCTGGTCGGCTTGCGCGACGGGCGTGGCGAGATCGACGACATCGACAACCTGGGCAACCGCCGGGTGCGTTCGGTGGGCGAGCTCCTCGAGAACCAGTACCGCGTCGGCCTGCTGCGCATGGAGCGGGCGATCAAGGAGCGCATGAGCTCGGTCGACATCGACACGGTCATGCCGCACGACCTGATCAACGCGAAGCCGGCGGCCGCGGCCGTGCGGGAGTTCTTCGGCTCTTCGCAGCTCTCGCAGTTCATGGACCAGACGAACCCGCTGTCCGAGATCACCCACAAGCGCCGCCTGTCGGCCCTTGGCCCGGGCGGTCTGACGCGTGAACGCGCCGGGTTCGAGGTCCGCGACGTGCACCCGACCCACTATGGCCGTATCTGCCCCATCGAGACGCCCGAAGGCCCGAACATCGGCCTGATCAACTCGCTCGCCACCCACGCGGTGGTGAACAAGTACGGCTTCATCGAGAGCCCCTATCGCCGCATCCGCGACGGCAAGACGACCGAGGAGGTCGTCTACATGTCGGCGATGGAGGAGGCGAAGCACGTCATCGCCCAGGCCAACATCAAGCTCGAGGACGGCTCCATCGTCGAGGATCTGGTCCCCGGCCGGATCAACGGCGAGCCGTCGCTGCTTCCCAAGGAGCAGGTCGACCTGATGGACGTGTCGCCGAAGCAGGTCGTCTCGGTGGCCGCCTCGCTGATCCCGTTCCTGGAGAACGACGACGCCAACCGCGCCCTGATGGGCTCGAACATGCAGAAGCAGGCCGTGCCGCTCATCCAGTCGGATGCGCCCCTGGTCGGCACCGGCATGGAAAGCATCGTGGCCGTGGACTCGGGCGCCGTCGTGGCGGCGCGCCGTCCGGGCGTCGTGGAGCAGATCGACGGCACGCGTATCGTCGTGCGCGCCACGGAAGAGACCGACCCGTCGAAGCCGGGGGTCGACATCTACCGTCTGCAGAAGTTCCAGCGTTCGAACACCTCGACGTGCATCAACCAGCGTCCGCTGGTGCAGGTGGGCGACAAGATCCGTGCGGGCGACGTGATCGCCGACGGCCCGTCCACGGAACTGGGTGAACTGGCGCTGGGCCGGAACACGCTCGTCGCGTTCATGCCCTGGAACGGCTACAACTTCGAGGACTCGATCCTGATCTCCGAGCGCATCGTGCGCGACGACATCTTCACCTCGATCCACCTCGAGGAATTCGAGGTCATGGCCCGGGACACCAAGCTGGGCCCGGAAGAGATCACCCGCGACATCCCGAACGTCGGCGAGGAAGCCCTGCGCAACCTCGACGAGGCGGGCATCGTGGCGATCGGCGCCGAGGTGATGCCGGGCGACATTCTGGTGGGCAAGGTCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAAGAGAAGCTGCTGCGCGCCATCTTCGGTGAAAAGGCCTCGGACGTCCGCGACACCTCCCTGCGCCTGCCTCCGGGCGTCGCCGGCACCATCGTGGAAGTGCGGGTCTTCAACCGTCACGGCGTCGACAAGGACGAGCGCGCGCTGGCCATCGAGCGTCACGAGATCGACCGGCTGGGCAAGGACCGCGACGACGAGTTCGCGATCCTGAACCGCAACATGCAGGGCCGTCTGCGCCAGCTGCTGGTGGGCAAGACCGCCGTCTCGGGCCCGAAGGGCCTGGGCCGCGGCGAGATCAGCGCCGACAAGCTGGAAGAGATCGCGCCCGGCCTGTGGTGGCAGATCGCCCTGGACGACGAAAAGGCGATGGGCGAGCTCGAAGCGCTGCGCAAGCAGTTCGACGAGGGCCGCAAGCGCCTGGATCGCCGCTTCGAGGACAAGGTCGACAAGCTCCAGCGCGGTGACGAACTGCCCCCGGGCGTGATGAAGATGGTCAAGGTGTTCGTGGCGGTGAAGCGCAAGCTGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGCGTCATTTCCAAGATCCTCCCGATCGAGGACATGCCGTACCTGGAGAACGGCCAGCACGTGGACATCGTGCTGAACCCGCTGGGCGTGCCCTCCCGCATGAACGTCGGCCAGATCTTCGAAACCCACCTGGGCTGGGCTTCGGCCGGGCTCGGGAAGCAGGTCGCCGATCTGCTGGAAGATTGGCAGAACGGCGGTCAACGACAGGCGCTCCTGGACTACCTGGGCGACGCCTATGGTCCCCAGGAAGAACTGCCGGACACTGACGAGGAACTCATCGAGCTGGCCAAGAACCTCTCGAAGGGCATTCCGTTCGCGACCCCGGTCTTCGACGGCGCGCACATCGACGACATCGAGAACCTGCTGGAGAAGGCGGGCCTCGACCGTTCCGGCCAGTCGTACCTGTACGACGGCCAGACCGGCGAGCGGTTCAAGCGTCCGGTCACGGTCGGCTACATCTACATGCTGAAGCTGCACCACCTGGTGGACGACAAGATCCACGCCCGTTCGATCGGCCCGTACAGCCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCCCAGTTCGGCGGTCAGCGCTTCGGGGAAATGGAAGTCTGGGCGCTCGAAGCCTACGGCGCCGCCTACACCCTGCAGGAGATGCTGACGGTGAAGTCGGACGACGTGGCCGGCCGGACCAAGGTCTACGAGAGCATCGTCCGCGGCGACGACACCTTCGAGGCCGGTATTCCGGAGAGCTTCAACGTGCTGGTCAAGGAGATGCGCTCCCTCGGCCTGAACGTGGAGCTGGAGAACAGCTGA
PROTEIN sequence
Length: 1207
IVSQMHRSPGVFFDHDKGKTHASGKLLFAARVIPYRGSWLDFEFDAKDIVYVRIDRRRKLPATTFLMALGMDGEEILSTFYETVPYEKKKGGWATPYKAERWRGVKPEFPLIDADSGEEIAPAGQKISARNAKKFADNGLKTLLLAPEALNGRYLARDLVNFETGEIYAEAGDELDAGLLASLEEQGFNTLDVLDIDHVTVGAYVRNTLRIDKNTVREDALFDVYRVMRPGEPPTVEAAEAMFKSLFFDSERYDLSSVGRVKMNMRLELDCPDDVRILRKEDVLAVLETLVGLRDGRGEIDDIDNLGNRRVRSVGELLENQYRVGLLRMERAIKERMSSVDIDTVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATHAVVNKYGFIESPYRRIRDGKTTEEVVYMSAMEEAKHVIAQANIKLEDGSIVEDLVPGRINGEPSLLPKEQVDLMDVSPKQVVSVAASLIPFLENDDANRALMGSNMQKQAVPLIQSDAPLVGTGMESIVAVDSGAVVAARRPGVVEQIDGTRIVVRATEETDPSKPGVDIYRLQKFQRSNTSTCINQRPLVQVGDKIRAGDVIADGPSTELGELALGRNTLVAFMPWNGYNFEDSILISERIVRDDIFTSIHLEEFEVMARDTKLGPEEITRDIPNVGEEALRNLDEAGIVAIGAEVMPGDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVEVRVFNRHGVDKDERALAIERHEIDRLGKDRDDEFAILNRNMQGRLRQLLVGKTAVSGPKGLGRGEISADKLEEIAPGLWWQIALDDEKAMGELEALRKQFDEGRKRLDRRFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKILPIEDMPYLENGQHVDIVLNPLGVPSRMNVGQIFETHLGWASAGLGKQVADLLEDWQNGGQRQALLDYLGDAYGPQEELPDTDEELIELAKNLSKGIPFATPVFDGAHIDDIENLLEKAGLDRSGQSYLYDGQTGERFKRPVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYESIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENS*