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cn_combo_scaffold_3560_15

Organism: CN-SCN_Phenylobacterium_31x

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 10 / 38
Location: comp(9769..10101)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=3 Tax=Mesorhizobium RepID=E8TFL8_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 106.0
  • Bit_score: 139
  • Evalue 1.90e-30
XRE family transcriptional regulator {ECO:0000313|EMBL:KHA62662.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 110.0
  • Bit_score: 151
  • Evalue 6.90e-34
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 106.0
  • Bit_score: 139
  • Evalue 5.40e-31

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Taxonomy

Sphingomonas sp. Ant20 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGCAGTCGTCAGCCTTGGAATCCCTCCCGCCGCCCGTGCGGCGGTCGCTCACCAAGCTCGGGAGCGACATCGCCACCGCGCGGCGCAAGCGCAACCTGACGGCGGTGATGATGGCGGAGCGCGTCGGCGCGGCCAAGACCACCTACCTGAAGGTGGAGAAGGGCGATCCGTCGGTTTCGATGGGGATCTACGCCATGGCGCTATACGTCCTGGGCTTCGGCGAGGCGGTCGGAGACATCGTCGATCCTCGTCGCGACGACGTCGGCCTGCTGCTCGACGTCGACCGCTTGCCCAAGCGCGTGCGCCCGAAGAAGGCGCCGAAGCCCCTATGA
PROTEIN sequence
Length: 111
MQSSALESLPPPVRRSLTKLGSDIATARRKRNLTAVMMAERVGAAKTTYLKVEKGDPSVSMGIYAMALYVLGFGEAVGDIVDPRRDDVGLLLDVDRLPKRVRPKKAPKPL*