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cn_combo_scaffold_23_13

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 19932..22814

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL62_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 947.0
  • Bit_score: 602
  • Evalue 7.00e-169
TPR repeat protein similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 944.0
  • Bit_score: 620
  • Evalue 9.20e-175
TPR repeat protein {ECO:0000313|EMBL:BAL93749.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 947.0
  • Bit_score: 602
  • Evalue 9.90e-169

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2883
ATGGGACGACGGATGAACGAATGGGGCGGGCGTCACCCGATTGTCGCGGCAATGCTGGCGGCGCTGGCCGCACTTTCGGCCTGCACCGGCCGTACCGACGCCGAGATCGAGTCCGAGGCCCTGGCCGAGGCGCAGGCGGCGCTGGAGCGCAAGGACACGGGCACGGCCATCGTCACGCTGAAGGATTTGCTCGAACGTCAGCCCGACTCCGGCGCGGCACGGCTTGCGCTGGCCCAGGCGCTGCGCGCCCAGGGCGATGCCGCCACCGCGGAGATCGAGTTCGGCAAGGCCGAGGAACTGGGCGTGGAGGCTCCGCGCGTCGTGCCCGCGCGCGCGCGCGCCCTGCTGGCCTCGGGCAAGGCCGCGCAAGTGCTGGAGCGCTACCGCGAGCGCCGGCTCGGCGACCCTGGGGCCGATGCCGACCTCCGGGTGACGCTGGCGATCGCCGCGGCGGCCCGCGGCGAGCCGGCGCTGGCCGAGCGCTTTCTCGCGGAAGCTGCCAGCGCCGGCCCGGAGCGGCCGCGCGCGACGCTGCTGCGCGCGCGCCTGGATCTGGTCGCCGGTCGTGCCGACGCCGCACTCGCGCGGCTGCAGCAGGCCGCAACGACGGCCGCCGGCACGGAGGCCGCCGACATGCGGCTGCTGGAAGGCGAGATCCTGGCCTCGCGCCCGGGCCGCGGCGACGAGGCCATGGCGGCGTTTCGCCATGCGCTACAGGCCGAGCCGGGGCACGTCGACGCACAGCGCGCGCTCGTGCTGATGCTGCTGGCGCGCGGCGACACCGCGGGCGCCCAGACGCAGGTCACTGCGCTCGAGCGCAGCGCGCCGCGCAGCAGCACGCCCAGGCTGCTGCGCGCGATGATCGACTTCGAACGCAAGGACTACGGCGCGGCGCGCGACAAGCTGCAGCCGCTGCTGGCCGCGTCACCGTCCAACCCCGTCCTGCTCGAACTCGCGGGCGCGACCGAATTCCACCTCGGCGCGCTGGACAAGGCCGAGACGCTGCTGAAGACCGCGCTCGAACGCAACGCGCAGGCGCTCCTGGCACGGCAGACGCTCGCCCGCCTCTACCTGCGGCGCGGGCAGGCGGACCAGGTGCTGGAGACGCTCGCGCCGCTGCTGCAAGGCGTGGCGCCGCCGGTCGCGGCGCTGACGATGGCCGGGGAAGCGCAGCTGATGCTGGGCGAAGCCGCACAGGCGCAAAGGCTCTTCGAAAGCGCCACGGCGCGGGAGAAGGACGACGCCGGGGCCGGCATCGCCCGCGGCCCCGACCGTCCCGACCGCCCCGGCCGCCCCGACCGCCCCGGCAGCGCCGATGACGCGATGCGCGTGCGCGTCGCGTTGGCCCGGCTCGCGCAAGGCGAGGAAACCGCCGCGCTCGCCGAGCTGCAGGCGATCGCGCGCCGCAGCCCGTCGACCCTGGCCGACACCGCGCTGGTCGCGCACCACATGCGCAAGCGCGACTGGCCACGCGCGCTGGCGGCGATCGATGCCTTGCAAAGCAAGCAGGCCGACGGCCCGGCCGCGCCCCTGCTGCGCGGACGCGTGCTCTCCGCGCGCGGCGACTTCGCCGGGGCGCGCGCCAGCTACGAGGCGGCCCTGCAGGCGCAGCCGGGGCTGCTGCCCGCGGTGCAAGGCCTGGCCGGGCTGGACATCGCCGAGGGCAAGCCCGAGCAGGCGCGCGCCCGCCTGCAGGCGCTGCTGGCCCAGCGACCGGGCGATGCCGCGGTGCGGCTCTCGCTCGTCGAGGTGATGGACCGCAGCGGCATCCCGCCCGCGGAAGTGATCGCCCAGCTACGCCAGGGCGTCGCGGCGAGCACCGGCAACGTGGCGCTGCGGCTGCGCCTGGTGAACACGCTGCTGCAGGACGGCCAGGCCGCCAGCGCCAAGACCGCCGCCGCCGAGGCGGTGGCGGCAGTTCCCGGCAACGCCGAGCTGCTGCACGCCCAGGGCCGCGCGGCGCTGGCGGCTGGCGAGCACGAGCAGGCAGTGACGATCTTCAACGAGCTCGCGCAGCGCCTGCCGAAATCGGCTCAGCTGCAACTCGATCTGGCGAGCGCGCGCATCGGCCAGCGCGACCTCGCGGGCGCCGAACGCCATCTGCGTCAGGCGCTGGCGCTGGCGCCGGAGATGGCGCTGGCGCAAGAGTCGCTGCTGGCCACCTTGCTGCAGCGCGGCCGCGCCGAAGAGGCGCTGGCCTTTGCCCGCGACGTCCAGAAGCGCCGGCCGCGCAGCGCCGCAGGCCTGCTGTTCGAGGGCGACGTGCAGTCCAGCCGCCAGCGCTGGGACGAGGCGCTGGCGGCCTACCGGCGCGCCTTGCAGCTCGAACCCTCGGGCCGCGTGGCGCTGCGGCTGCACGGCGCGTTGATGGCCGCGGGCCGCAGCGACGAGGCCGAGCGCCACGCCAACGCCTGGGCGGCGGCGCATCCGCAGCAGCTCGACTTCGCCGCCTACCTCGCCGACTTGCGCCTGGCGCGCGGCGATCTCGCGGGTGCCGAGGCCGCATACCGCGCGCTGGTGCAGCGCACGCCCGACCATGCCGGGCCGCTGAACAACCTCGCCTGGCTGCTGGCCCGCCAGGGCAAGCCCGGCGCGCTGACGATGGCCGAGCGCGCCCGCGCCGCCGCACCCTACAGCGCCGCGGTCCAGGACACGCTGGCGCTGGCGCTCGAGTCCGAAGGCCAGATCGGCCGCGCCGCCGAGGTGCAGGCGCGCCTCGTCGAGCGCCAGCCCGGCAACCCGGACTACCGGCTGCACCTGGCACGCCTGCTCATCAAGGCCGGCGACAAGGCCAAAGCGCGCGGCGAGCTCGACACCCTCGCCCGCCTGGGCGAGCGCTACCCCCGGCAGCACGAAGTCGCGGCACTGCAGGCCCAGCTTTGA
PROTEIN sequence
Length: 961
MGRRMNEWGGRHPIVAAMLAALAALSACTGRTDAEIESEALAEAQAALERKDTGTAIVTLKDLLERQPDSGAARLALAQALRAQGDAATAEIEFGKAEELGVEAPRVVPARARALLASGKAAQVLERYRERRLGDPGADADLRVTLAIAAAARGEPALAERFLAEAASAGPERPRATLLRARLDLVAGRADAALARLQQAATTAAGTEAADMRLLEGEILASRPGRGDEAMAAFRHALQAEPGHVDAQRALVLMLLARGDTAGAQTQVTALERSAPRSSTPRLLRAMIDFERKDYGAARDKLQPLLAASPSNPVLLELAGATEFHLGALDKAETLLKTALERNAQALLARQTLARLYLRRGQADQVLETLAPLLQGVAPPVAALTMAGEAQLMLGEAAQAQRLFESATAREKDDAGAGIARGPDRPDRPGRPDRPGSADDAMRVRVALARLAQGEETAALAELQAIARRSPSTLADTALVAHHMRKRDWPRALAAIDALQSKQADGPAAPLLRGRVLSARGDFAGARASYEAALQAQPGLLPAVQGLAGLDIAEGKPEQARARLQALLAQRPGDAAVRLSLVEVMDRSGIPPAEVIAQLRQGVAASTGNVALRLRLVNTLLQDGQAASAKTAAAEAVAAVPGNAELLHAQGRAALAAGEHEQAVTIFNELAQRLPKSAQLQLDLASARIGQRDLAGAERHLRQALALAPEMALAQESLLATLLQRGRAEEALAFARDVQKRRPRSAAGLLFEGDVQSSRQRWDEALAAYRRALQLEPSGRVALRLHGALMAAGRSDEAERHANAWAAAHPQQLDFAAYLADLRLARGDLAGAEAAYRALVQRTPDHAGPLNNLAWLLARQGKPGALTMAERARAAAPYSAAVQDTLALALESEGQIGRAAEVQARLVERQPGNPDYRLHLARLLIKAGDKAKARGELDTLARLGERYPRQHEVAALQAQL*