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cn_combo_scaffold_139_17

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(19049..20515)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system outer membrane lipoprotein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKZ6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 478.0
  • Bit_score: 409
  • Evalue 4.40e-111
RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:EGJ09014.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoa similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 478.0
  • Bit_score: 409
  • Evalue 6.20e-111
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 476.0
  • Bit_score: 387
  • Evalue 5.10e-105
  • rbh

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGCACCGATCGACCGCCCTGCCACCGGCGCGCCCGAGGACTTCGCGGCTCGTGCTGCCCGGACTGATCGCCCTTGTTGCAGGCTGCGCGCCGTTGGCCACCAGGCCCGACCCGCCGCCGCAGGCGGCGCGGGAACTGCCGGCGCGGTGGGCTCAGGCCTTGCCTGCGGCAGCCGCGACCGACGCCAAGGCGCAGCGCGACTGGTGGCAGGGCTTCGACGACGCGCAGCTGCCGGCGCTGGTCGACGAGGCGCTGGCCCACAACCTCGAGTTGCGTGCGGCCGCCAGCAACCTGGCCCGGGCGCGCGCCCTGCGCGAGCTCAGCGCCGCCACGCAGCAACCCAGCCTCGGGCTGGGTGCAAGCGCCGGCCGCAGCCGCAGCGCCGGGCGCAGCGTCAACAGCCTGCGGGCGAGCCTGGACGCGAGCTGGGAGGCCGACCTCTTCGGCGCGAACGACGCCGCGCTGGCGGCGGCTGCAGCCGACGTCGACACTGCCGCGGCCATGCTGCAGGCCACGCGGCTGGCGGTGGCCGCCGAAACCGGGCTGGCCTACCTGCAATGGCAGGACGCGCGCGCGCAGCGGGCGGCGGCGGCGGCCAGTCTGGACAGCCAGCAGCAGACGCTGGCCCTGGTGCAGTTGCGCGAGCGCAGCGGGCTCGCCGGCGGGCTCGAAGCGGAGCAGGCGCGCAGCGCCGTGCAGGGGCTGCAGGCGCGCCTGGCAGCGCTGCAGCACACGCAGGCCCAGGCCGCGAATGCCCTTGCCCTGCTCACCGGACGCAACCCGGCCCAGGCCGCCGAGTTGCTTGAACGGGCGCAGCAGCGGCCCGCCGCGCAGGCGGTGCGCGCCCCGGCGCTGCCCGCGCTGCCGCAGCCGGCACAGCTGCTGCAGCGGCGCTTCGATCTGCAGGCGGCGCAGCACCGCATCGAGTCGCAGCTGGCCACGCTGGCGCAGCGCGAGGCCGAGCGCAAGCCGACGCTGCGCCTCAGCGGCAACCTGGGCCTGCAGGCTGCCACCTGGTCGGCGCTGGGGGGCAGCGGCGCCCTGCTCGCCGGCCTCGCCGCGGCGATCGACTGGACGCTGCTCGACGGCGGCGCCGGCCAGGCGCGCGTGCAGGCGCAGCAGGCCGCGCTCGAGGCGGCACGCATCGACTGGAAGGCCGCGGTGCTGGCGGCCACCCGCGACGTCGAGGACGCGCTCTCGGCGCTGGCCAGCGCGCGCCAGCGCGAGGACGCCCTGGCGCAGGCCGTCGGCGCCGCCGACGAGGCGCTGCGCCTGGCGCGCATCGGCTTCGACGCCGGCCTCACCGACTTCCTGAACCTGCTCGATGCCGAGCGCAGCGCCCTCGCCGCTGCGGAGTCCCTCGTCGGCGCCCGCACCGATCTCGCCGGCAGCCACATCCGCCTCTACAAGGCCCTGGGCGGCGGCTGGAGCCGCCCCGATCCCGACGCGAGGAGCACGCGCCCGTGA
PROTEIN sequence
Length: 489
MHRSTALPPARPRTSRLVLPGLIALVAGCAPLATRPDPPPQAARELPARWAQALPAAAATDAKAQRDWWQGFDDAQLPALVDEALAHNLELRAAASNLARARALRELSAATQQPSLGLGASAGRSRSAGRSVNSLRASLDASWEADLFGANDAALAAAAADVDTAAAMLQATRLAVAAETGLAYLQWQDARAQRAAAAASLDSQQQTLALVQLRERSGLAGGLEAEQARSAVQGLQARLAALQHTQAQAANALALLTGRNPAQAAELLERAQQRPAAQAVRAPALPALPQPAQLLQRRFDLQAAQHRIESQLATLAQREAERKPTLRLSGNLGLQAATWSALGGSGALLAGLAAAIDWTLLDGGAGQARVQAQQAALEAARIDWKAAVLAATRDVEDALSALASARQREDALAQAVGAADEALRLARIGFDAGLTDFLNLLDAERSALAAAESLVGARTDLAGSHIRLYKALGGGWSRPDPDARSTRP*