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cn_combo_scaffold_139_44

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 51815..52522

Top 3 Functional Annotations

Value Algorithm Source
rsmE; ribosomal RNA small subunit methyltransferase E RsmE (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 239.0
  • Bit_score: 274
  • Evalue 3.00e-71
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 239.0
  • Bit_score: 274
  • Evalue 1.50e-70
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HY55_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 239.0
  • Bit_score: 274
  • Evalue 1.10e-70

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGTTGCGCCTCTTCGTCGATGCTGCGCTCGTGGCCGGACGGATCGTCGACCTGCCCGCCGGGCCGGCGCGCCACGTGCAGGTGCGCCGCCTGCAGCCCGGTGAAGCGCTCGTGCTCTTCGACGGCCGCGGTGGCGAGTGGCGGGCGCGCGTGCACGCGATCGGTCGGCAGGCGGTGCAGGTCGAGCCGATGGCGCACGAGGCGGCCGAGCGCGAGCTGGTCCCCGCGGTGACGCTGATCGTTGGCATGCCTGCCAACGAGCGCATGGACTGGCTGGTCGAGAAGGCGACCGAACTCGGCGCCGCGGCGCTGCAGCCGGCGACCTGCGAGCGCTCGGTGCTGCGCCTCGAGGGCGAGCGCGCCGCGCGCCGCCGCGCGCACTGGCAGGCGCTGGCGGTGGCCGCGGCCGAGCAGTGCGGACGCACGCGCGTGCCGCAGGTGCATGCGGTGCGCGACCTTGGCGAGATCCTGCCCAGCTGCGCGCCGGACGCACGGCGCTGGCTGCTCAGCCCCGTCGCGCAGGCCGCGCCGCAGCGACCGACGGACAAGGGTCCGCTCATCGTCCTGAGCGGTCCCGAAGGCGGCCTGGCGCCGGCCGAGGAGGCGGCGGCGCGTGCCGCGGGCTTCGAGGCGGTCGGTCTGGGCCCGCGCGTGCTGCGCGCCGAGACCGCGCCGCTGGCGCTGCTGGCCTGGCTGGGGCTGCCCTGA
PROTEIN sequence
Length: 236
MLRLFVDAALVAGRIVDLPAGPARHVQVRRLQPGEALVLFDGRGGEWRARVHAIGRQAVQVEPMAHEAAERELVPAVTLIVGMPANERMDWLVEKATELGAAALQPATCERSVLRLEGERAARRRAHWQALAVAAAEQCGRTRVPQVHAVRDLGEILPSCAPDARRWLLSPVAQAAPQRPTDKGPLIVLSGPEGGLAPAEEAAARAAGFEAVGLGPRVLRAETAPLALLAWLGLP*