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cn_combo_scaffold_139_51

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(57745..58116)

Top 3 Functional Annotations

Value Algorithm Source
LexA repressor {ECO:0000313|EMBL:EWS62312.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 116.0
  • Bit_score: 127
  • Evalue 1.20e-26
hypothetical protein id=5080900 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 113.0
  • Bit_score: 125
  • Evalue 4.20e-26
SOS response transcriptional repressor, RecA-mediated autopeptidase similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 126.0
  • Bit_score: 109
  • Evalue 8.80e-22

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Taxonomy

Hydrogenophaga sp. T4 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGATTCCCATCCGGCCCATCCGCCCCATCGCCTCCGCATCGGCCGACGACGGCGCCGGCTGCAGCGGCGGCGAGTCCTTCGCGCTGCGCGTGCTCGGCGACGACATGGCCCCCGAGTTCAGGCACGGCGAGATCGTCATCATCGAGCCCGACGGCGCCGTCGGCGATGGCCGCTTCGTGCTCGCCCGCCACGGCGAGGGCTGGCTGCTGCGCCAGTTGCTGCGGCATGGCGAGGCCTGGGTGCTGCACGCCCTCAACGACGCCCGCGGCGACGCCCCGGACCTGCCGCTGACCGACCTCGCCGCCGTGCGTGGCGTCGTCATCCAGAAGGCCGTGCCGGGGCAGCGCCGGCTCGGCAAGTCCTATCTCTGA
PROTEIN sequence
Length: 124
MIPIRPIRPIASASADDGAGCSGGESFALRVLGDDMAPEFRHGEIVIIEPDGAVGDGRFVLARHGEGWLLRQLLRHGEAWVLHALNDARGDAPDLPLTDLAAVRGVVIQKAVPGQRRLGKSYL*