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cn_combo_scaffold_414_4

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 2753..4090

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0114 family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q330_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 444.0
  • Bit_score: 624
  • Evalue 1.00e-175
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 444.0
  • Bit_score: 624
  • Evalue 2.90e-176
Type VI secretion protein, VC_A0114 family {ECO:0000313|EMBL:ADX45432.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 444.0
  • Bit_score: 624
  • Evalue 1.50e-175

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGGTCTGGCGACGCAAGGTCGTGTGGTCGGAGGGCATGTTCCTGCGGCCGCAGCATTTCCAGCAGCAGGAGCGCCACTTCGAGGCCCTGCTGCAGCGGCGCAGCCACGCCGCCGAACCCTTCTTCTGGGGCTTCTCGCGGCTCGTGCTGGATCGCGAGCTGCTGGCGCTGGGCAAGATCGGCATACGCGAAGCCGAGGGCGTGTTCCCCGACGGCACGCCCTTCGCCATCCCGCAGGACGACGATGCGCCGCCACCGCTGGAGGTGCCGCGCGAGCTCAAGGACAGCCTCGTCAGCCTGGCGCTGCCGATGCGCCGGGCCAGTGCCGTGGAGGTGGGGTTCGGCGGCGCCGATTCGACGCTGGCGCGCTACCACGCGCTGGTGCACGAGGTCGCCGACGTCAACGAAGCCGGCGCGCAGGCCACCGAAATGCAGCTGGCCCAGGCGCGCATGGTCGTGCGTCCGGCAGCCGAGGTCGCCGGCGGCTGGGTCGCGCTGCCGCTCGTGCGCGTGGTCGAGCGCCGTGCCGACGGCTCGCTGCTGCTCGATGCGGCCTACATCCCGACCGTGCTCAACAACGGCGACAGCACGAGCCTGCTGGCACTGTGCCAGGAACTGCTGGGCCTGCTGCGCCAGCGCGGGCAGGCGCTGGATGCGCGCATGTCGCAGCCTGGGCGCGGCGGCACCGGCGAATTCGGCGACTTCCTCATGCTCTGCCTCATCAACCGCTGGGAGCCGGTGGTCGAGCACTGGGCGCGGCTGCGCGCCGTCCATCCCGAGCGGCTGTTCCAGGAACTGCTGCGCCTCGTCGGCGAGCTCGCGACCTTCCGCCGCGAGGGCCGCCGCCCGCCCGAGCTGCCGGCCTACGACCACGACGACCTGCAGTCCTGTTTCGCGCCGCTGATGCTCGAACTGCGGCGCGGCCTGTCCTCGGTGCTCGAGCAGAACGCGATCCAGATCGAGGTGCGCGAGCGCCAGTACGGCGTGCACGTGGCCATCATCCCGAGCGCGGAGATGCTCGACAGCTGTGAATTCGTGCTGGCCGCGCAGGCACAAACCAGCCCAGAATTCCTGCGCAGCAACTTCCCGGCACAAGTGAAGATGGGCCCCGTGGAACGCATCCGCGATCTGGTCAACCTGCACCTTCCCGGCGTCGTCATGTCGCCGCTGCCGGTGGCGCCGCGCGACATCCCCTACCACGGCGGCTTCACCTACTTCCAGGTCGACACCACGCACGAGCTGTGGCGGCAGCTGCAGAAGTCAGGCGGCCTTGCGATGCACGTCTCGGGCGCCTTCCCCGAGCTGCAACTCGAGCTGTGGGCCATCCGCCGCACCTGA
PROTEIN sequence
Length: 446
MVWRRKVVWSEGMFLRPQHFQQQERHFEALLQRRSHAAEPFFWGFSRLVLDRELLALGKIGIREAEGVFPDGTPFAIPQDDDAPPPLEVPRELKDSLVSLALPMRRASAVEVGFGGADSTLARYHALVHEVADVNEAGAQATEMQLAQARMVVRPAAEVAGGWVALPLVRVVERRADGSLLLDAAYIPTVLNNGDSTSLLALCQELLGLLRQRGQALDARMSQPGRGGTGEFGDFLMLCLINRWEPVVEHWARLRAVHPERLFQELLRLVGELATFRREGRRPPELPAYDHDDLQSCFAPLMLELRRGLSSVLEQNAIQIEVRERQYGVHVAIIPSAEMLDSCEFVLAAQAQTSPEFLRSNFPAQVKMGPVERIRDLVNLHLPGVVMSPLPVAPRDIPYHGGFTYFQVDTTHELWRQLQKSGGLAMHVSGAFPELQLELWAIRRT*