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cn_combo_scaffold_414_6

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 5484..9134

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein IcmF n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q332_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 999.99
  • Bit_score: 1681
  • Evalue 0.0
Type VI secretion protein IcmF {ECO:0000313|EMBL:ADX45434.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax aven similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 999.99
  • Bit_score: 1681
  • Evalue 0.0
type VI secretion protein IcmF similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 999.99
  • Bit_score: 1681
  • Evalue 0.0

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3651
ATGCTGCGCACGATCGCTGCCTTCCTCTTCAACCGCATCACGCTGGCGCTGGTCGGCCTGCTGCTGCTGAGCCTCGTCATCTGGTTCGTCGGCCCGCTGGTGGCGATCGGCCGCTGGCGCCCGCTGGACGGCGAAGGCATCCGCTGGCTGCTCATCGGCCTGCTCTGGATGCTCTGGCTGCTCAAGCAGCTGCTGCACTGGTGGCGCCGCAGGAACATGAACGGCCGCATGATGGCCTCGCTCGCCCGCTTCACCGCGGGCGACCCGAATGCCGCGGCGCCAAGCGCCGGGCAGCAGGAGGTGAGCGAGCTGCAGGGTCGCTTCAGGGAAGCCATCGACACGCTGGCCAAGGCGCGCTTCGCGCAGGCCGACGGCAGTCTCTTTGGCCGCCTGACGCGGCGCTACATCTACCAGCTGCCCTGGTACCTGATCATCGGTTCGCCGGGCTCGGGCAAGACGACGGCGCTGGTCAATTCGGGCTTGAACTTCCCACTCGCCGACAAGTTCGGCAAGGGCTCGATCCAGGGCGTGGGCGGCACGCGCAACTGCGACTGGTGGTTCACCGACCAGGCGGTGCTGCTGGACACCGCGGGCCGCTACACCACGCAGGAGAGCGACGCGCAGCAGGACAGCACCGCCTGGCGCGGTTTCCTGCAACTGCTGCGGCGCTTTCGCGCGCGCCAGCCGATCAACGGCGTGTTGGTCACGCTCAGCGTGCAGGAGCTGCTCTCCAGCACCGAGGCCGAACGAAGCCAGCTCGCGCACGCCATCGGGCGGCGCCTGGCCGAGCTGTGCGAGGAGCTGGCGCTGCGCTTCCCGGTCTACGTGCTGGTGACGAAGACCGACCTGCTGGCGGGCTTCAGCGAGTTCTTCGGGCCCATGAGCCGCGAAGAGCGCGCGCAGGTGCTGGGCTTCACCTTCCCCTACGTCGAGGGCACGGTGCAGCCCGACCCGCTGGCGATCTTCGGCGAGGAGTTCGATCTCGTGGCGCGCCAGGTCGATCGCCTGCTGCCGCAGCGCCTGGCCGCCGAACCCGACCTCGCCCGCCGCGGCCTGCTGTACGCGCTGCCGCAGCAGTTCGTCGGCCTGCGCGACGTCGTGCGCGACACGCTGGCGCAGGTCTTCGCCTCGACGCAGTTCAAGGAAAAGCCGCTGCTGCGCGGCGTCTACTTCACCAGCGGCACGCAGGAGGGCATGCCCTTCGACCGCGTCATGTCCTCGCTGGCGCACCGCTTCGGCGTGCAGTCGGCGGCCACCCAGGCGCTGAAGACGCAGGGCGGGCGCAGCTACTTCATCGAGACGCTGTTCAAGGGCGTCATCTTCAACGAGGCCGGCCTGACCGGGCGCAACGCGCGCAAGGAAAGGCAGCTGCGCCTGCTGCAGGCCGGCGGCCTGATCGCGCTCGGCCTGGGACTCGTCGGCCTGGGCGCGGCCTGGTTCAACAGCTGGGGCAACAATCGCGGCTACCTGGACGAGGTGAGCAGCAACGCCGGCGTGCTGCGGCAGGCAGTCGACGAGGGCAAGCGGGCCGACCCCGACAGCATGGTGGCGCTGCTGCCGATGCTCGACCACGCCGCCGCGGTGGCGCGCAGCGGCCGCTACGAGGGCGACTCGGCGCCGCTGTCCTGGCGCTGGGGCCTGCTGCAGGTGCCCAAGATGGAGGCCGCCGCCGAGAGCACCTACCTGCGGCTGCTCGAGGACGCCTGGCTGCCGCGCCTGACGCGCCAGATGCGCCGCTCGCTGCAGGAGGTCTCGACCGACAACCCCGAGGCGAGCTACGAGGCGCTCAAGGCCTACCTGATGCTCTACGAGCCGGAGCACTTCGACGCCGCCATCGTGCGCAACTGGATGGCCACCGAATGGGCGCGCACGCTGCCGCCGCAGGTACAGGAGCGCGGCATCATCGAGCGCCTGACGCGCCACCTGGACGCGCTCACGCAGGAGCGCACCGTCAGCGCGCGCGAGCCGATCGACGCCGCCCTCGTGGCCGAGGTGCGCCAGCGCCTGCTGCAGATGTCGCCCGCGCAGCGCGCCTACAGCCGCCTCAAGCAGCTGCTGCTGACGGGCAGCGACCAGCCACCCGAGTTCACCGTGGTGCGCGCGGCCGGTCCCGAGGCGCCGCAGGTCTTCACGCGGCACAGCGGCAGGGCGCTGACGCAGGGCATCCCGGGCCTCTTCACCTACGACGGCTACCACGGACTGTTCCTCGGCCAGCTCGCCAAGACGACGCCGCTGCTCAGTCACGAGGAAGGCTGGGTGCTCGGGCAGGCGCCCGCCGGGCGCAGCGCCGCGGCCACCGCGGCCGGCGAGGCCTTGAGCGGCCAGCGCGCCAACGAGGTGAAGCGGCTCTACCTGATGGACTACGCCAAGCGCTGGGAGGACTTTCTCGCCGACGTGCGGCCGGTGCAGATCGGCTCGCTCGAGCAGGCCGGCGAGCAGGCTCGCCTCTACGCCGCGCCCAACTCCACGATCGAGCAGTTCGTGCGCGCGGTGGCGCGCGAGACCACGCTGTCGCAGAAGCCGGGCACCGGCGACAGCGGCTCCACCAGCACCAGCAGCTGGCTGGGCGAGAAGCTCAATCGCATCAAGGAGGAGCAGGCCCAGCTCAGTCGCCTCACCGGCCGGCAGGTCAACGTCGGCGGCCTGGCCACCAGCGGCACGCTCGAGGCCGACATCGTCGACGTGCGCTTTCGCGAGTACCGGCGTCTGGCCGGCGTGGGCGCCACGGGGCCGGCGCCGATCGTCAACAGCCTGGCGGTGATCAACGAGGCGGCGGCGGTGATCGCCTCGGCGCGCCAGCAGGTCACTGCCGGGGGCAGCGTGCCGCCGACCCTGGCCGGCACGCTGGAGAAGGTGCGCGGCGAGAGCCAGCGCCTGCCGGCGCCGATGTCGGTGATGTTCAGCAGCCTGGCCGCTGCGACTTCGGGGCTCGTGGGCAGCGACGTGCGCCGCACCATCGGCGGCAACCTGAACGCGACCATCGGCGACTTCTGCCGCAAGGCGATCAACGGCCGCTACCCGTTCGCGCGCGGCGCCGCCCGGGACGTGACCGCCGACGACTTCGCGCGCCTGTTCGCGCCCGGCGGCCTGTTCGACGAGTTCTTCCGCGCCCAGCTGCAGCCGATGGTCGACGTCTCGCGCGAGCCCTGGACCTTCAAGCAGGGCATCGACGGCACGCCGGTGGGCGGCTCGTCGGCCCTGGCAGCGTTCCAGCGCGCGGCAACCATCCGCGACGTCTACTTCCGCGCCGGCGGGCGGCTGCCCTCGCTGCGCGTGGAGATCAAGCCCCTGGACATGGACGCCGGCATCGCGCAGATGGTGCTCGACGTCGACGGCGAGGTGCTGCGCTACCAGCACGGGCCGCAGATTCCGAAGTCGATGAGCTGGCCCGGGACACGCGGCACCAGCCAGGTGCGGCTGCAGCTCACCACCGCCGGCGGCGAGAACCTCGGCCTGCTCACCGAGGGACCCTGGGCACTGCACCGGCTGTTCGACCGCGCCCAGCTCGCGCCGGGCAGCACGCCGGAACGCTTCATCGCCGCCTTCGCCGTCGAGGGCCGGCGGCTGCGCGTCGAGGTCACGGCCAGCAGCGTGCAGAACCCCTTCCGGCTGCAGGCGATGGAAGGCTTCTCATGCCCGAGCCAACTGTAG
PROTEIN sequence
Length: 1217
MLRTIAAFLFNRITLALVGLLLLSLVIWFVGPLVAIGRWRPLDGEGIRWLLIGLLWMLWLLKQLLHWWRRRNMNGRMMASLARFTAGDPNAAAPSAGQQEVSELQGRFREAIDTLAKARFAQADGSLFGRLTRRYIYQLPWYLIIGSPGSGKTTALVNSGLNFPLADKFGKGSIQGVGGTRNCDWWFTDQAVLLDTAGRYTTQESDAQQDSTAWRGFLQLLRRFRARQPINGVLVTLSVQELLSSTEAERSQLAHAIGRRLAELCEELALRFPVYVLVTKTDLLAGFSEFFGPMSREERAQVLGFTFPYVEGTVQPDPLAIFGEEFDLVARQVDRLLPQRLAAEPDLARRGLLYALPQQFVGLRDVVRDTLAQVFASTQFKEKPLLRGVYFTSGTQEGMPFDRVMSSLAHRFGVQSAATQALKTQGGRSYFIETLFKGVIFNEAGLTGRNARKERQLRLLQAGGLIALGLGLVGLGAAWFNSWGNNRGYLDEVSSNAGVLRQAVDEGKRADPDSMVALLPMLDHAAAVARSGRYEGDSAPLSWRWGLLQVPKMEAAAESTYLRLLEDAWLPRLTRQMRRSLQEVSTDNPEASYEALKAYLMLYEPEHFDAAIVRNWMATEWARTLPPQVQERGIIERLTRHLDALTQERTVSAREPIDAALVAEVRQRLLQMSPAQRAYSRLKQLLLTGSDQPPEFTVVRAAGPEAPQVFTRHSGRALTQGIPGLFTYDGYHGLFLGQLAKTTPLLSHEEGWVLGQAPAGRSAAATAAGEALSGQRANEVKRLYLMDYAKRWEDFLADVRPVQIGSLEQAGEQARLYAAPNSTIEQFVRAVARETTLSQKPGTGDSGSTSTSSWLGEKLNRIKEEQAQLSRLTGRQVNVGGLATSGTLEADIVDVRFREYRRLAGVGATGPAPIVNSLAVINEAAAVIASARQQVTAGGSVPPTLAGTLEKVRGESQRLPAPMSVMFSSLAAATSGLVGSDVRRTIGGNLNATIGDFCRKAINGRYPFARGAARDVTADDFARLFAPGGLFDEFFRAQLQPMVDVSREPWTFKQGIDGTPVGGSSALAAFQRAATIRDVYFRAGGRLPSLRVEIKPLDMDAGIAQMVLDVDGEVLRYQHGPQIPKSMSWPGTRGTSQVRLQLTTAGGENLGLLTEGPWALHRLFDRAQLAPGSTPERFIAAFAVEGRRLRVEVTASSVQNPFRLQAMEGFSCPSQL*