ggKbase home page

cn_combo_scaffold_1480_14

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 15322..16515

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002375167 similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 375.0
  • Bit_score: 383
  • Evalue 2.10e-103
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 385.0
  • Bit_score: 383
  • Evalue 6.00e-104
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADX46901.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 385.0
  • Bit_score: 383
  • Evalue 3.00e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGATGCAGATTTCGCGCCTTCCCGATCGGCTGCTCGCGTCGCCTCCGGCCCGGTCTCGACGCGGGGCGGTCCTGGCGGTCGTGGCGCTGCTCGGGTTGGCAGGCTGCTCGGAGCAGCCCGAGGTCATCAAGATCGGCGTCGGCCAGCCGCTCAGCGGGCCGCTGGCCGCACTCGGGCAGGACATGGTCAACGGCACGAAGATGGCCGTCGACGAGATCAACGCGCGCGGCGGCGTGCGCATCGGCAGCACGCGCGTCAAGCTGGAACTGGTGAGTGCCGACGACAAGTCGGACGTCGAGGCGGGCAAGGCCGCGGCGCGAACGCTCGTCGATGCCGGGGTGACGGTGGCGATCGCGCACCTGAATTCGGGCGTCAGCATCGGTTCGGCCAAGACCTACGCCGACGCCGGCATTCCGCAGCTGGCGATCTCCACCAACCCGACCTACACGCGTCAGGACGTGCCCACGACGCTGCGCCTGGTGGCCAATGACAACCTGCAGGCCAAGGCGCTGGGCTCCTACGCGGCGCAGCTCGCGGGAGCGGAACGCTTCGCCGTGGTCGACGACGGCACGCCGTACGGCAAGGGCCTGGCCGACGACGCCGCCAAGGAGCTGGCGGCGGCCAAGAAACAGGTGCTGCTGCGCAAGACCACCGACGACAAGACGACCGACTTCGCCGCCATCGTGGACGAGATGGGCAAGGCCAAGGTCGACGTGCTCGTGGCCGCGCTCAACGATTTCCAGGTCGAGGCCATCGTCGAGCGGGCGGCCGCCAGCGGCCTGCAGCGCCTGCGCATCATCGGCGGCGATACGCTCAAGACCGACAAGCTCGGCAAGGTGGCCCACAAGGTGGCGGCGATCTACGCCACTTCGCCGATTCTCGAGGCCGGCGAGTTCCCCTCCGGATCGGTCTTCCTCGGCAACTTCCGCCGGCTCTACAAGGGCGATCCGGTCTATGGCGCGCACTACGCCTACGACACGGTCTACGTCGTCGCCGACGCGATCTCGCGCAACAAGAGCGCCGATCGCGCGCAGTTGCTCGAGCGGCTGAAGAGCCCGCAGTTCGACGGCAATGCGCCGGTGACGCGCTCGATGCGCTTCGGCGCCGACGGCGAGCAGCGCTACTCAACCGTGGCCGTCTATCTGCTGCGCAAGGGCGTCTGGCAGCCGCAGCTGCGCAGCGACCGCTGGTAG
PROTEIN sequence
Length: 398
MMQISRLPDRLLASPPARSRRGAVLAVVALLGLAGCSEQPEVIKIGVGQPLSGPLAALGQDMVNGTKMAVDEINARGGVRIGSTRVKLELVSADDKSDVEAGKAAARTLVDAGVTVAIAHLNSGVSIGSAKTYADAGIPQLAISTNPTYTRQDVPTTLRLVANDNLQAKALGSYAAQLAGAERFAVVDDGTPYGKGLADDAAKELAAAKKQVLLRKTTDDKTTDFAAIVDEMGKAKVDVLVAALNDFQVEAIVERAAASGLQRLRIIGGDTLKTDKLGKVAHKVAAIYATSPILEAGEFPSGSVFLGNFRRLYKGDPVYGAHYAYDTVYVVADAISRNKSADRAQLLERLKSPQFDGNAPVTRSMRFGADGEQRYSTVAVYLLRKGVWQPQLRSDRW*