ggKbase home page

cn_combo_scaffold_1480_19

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(22976..23587)

Top 3 Functional Annotations

Value Algorithm Source
rmlC; dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 186.0
  • Bit_score: 297
  • Evalue 1.90e-77
rmlC; dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 184.0
  • Bit_score: 287
  • Evalue 3.90e-75
dTDP-4,deoxyrhamnose 3,5 epimerase n=1 Tax=Rubrivivax gelatinosus S1 RepID=L8BA46_RUBGE similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 183.0
  • Bit_score: 295
  • Evalue 5.10e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_64_99 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGAAGCTCGTCGCCACCCCGCTGCCCGGCGTCGTCGTCGTCGAGCCCGCGGTCTTCACCGACGAGCGCGGCTGGTTCATGGAGAGCTGGAACCAGGCGCGTTTCGACGCCGGCCTGCGCGAGCTGGGCCTGCCCGCGCCGCGCCCCTTCGTGCAGGACAACCATTCCTGCAGCCGGGCCGGCGTGCTGCGCGGCCTGCACTACCAGCTGCCGCCGCACCCGCAGGGCAAGCTCGTGCGCGTCGTCAAGGGGGCCGCCTTCGATGTCGCCGTCGACATCCGGCAGGGGTCGCCATGCTTCGGGCAGTGGGTGGGCGTGGAGCTCTCCGCCGAGAACCGCCACCAGCTCTGGATTCCGGAGGGCTTCGCGCACGGTTTTCTCGCCCTCGAGGATGACACGCATTTCCTCTACAAGACCACCGACGTCTACGCGCGCGACTGCGAGCGCGCACTGCGCTGGGATGATGCGGCGCTGGCCATCGCGTGGCCGCTGGCGCGCGTCGGCGGCACGCCGATGATCGCGGCCAAGGATGCGGCGGCGCCGCGGCTCGGGGAAGCCGGGGATGGCTTGCCTGCAGCCTCACCCCTGCCCGCTCCGCCGGAGCGGGAGTGA
PROTEIN sequence
Length: 204
MKLVATPLPGVVVVEPAVFTDERGWFMESWNQARFDAGLRELGLPAPRPFVQDNHSCSRAGVLRGLHYQLPPHPQGKLVRVVKGAAFDVAVDIRQGSPCFGQWVGVELSAENRHQLWIPEGFAHGFLALEDDTHFLYKTTDVYARDCERALRWDDAALAIAWPLARVGGTPMIAAKDAAAPRLGEAGDGLPAASPLPAPPERE*