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cn_combo_scaffold_4658_9

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 8301..12542

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' RpoC (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 999.99
  • Bit_score: 2562
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 999.99
  • Bit_score: 2562
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKX9_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 999.99
  • Bit_score: 2562
  • Evalue 0.0

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4242
ATGAAGGGACTACTTGGCCTTCTGAACCAGTTCACCCCCGAGGAGCACTTCGACGCGATCAAGATCGGGCTCGCTTCGCCCGACAAGATCCGCTCCTGGTCCTTCGGCGAGGTGAAGAAGCCCGAAACCATCAACTACCGCACCTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCCAAGATCTTCGGGCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTGATCTGCGAGAAGTGCGGCGTCGAGGTCACGCAGACCAAGGTGCGCCGCGAGCGCATGGGCCATATCGACCTGGCCGCGCCCTGCGCCCACATCTGGTTCCTGAAGTCGCTGCCCTCGCGTCTGGGCCTCGTGCTCGACATGACGCTGCGCGACATCGAGCGCGTGCTCTATTTCGAGGCCTACGTCGTCACCGACCCGGGCATGACGCCGCTGAAGAAGTTCTCGATCATGAGCGAGGACGACTTCGAGGCCAAGCACGCCGAGTTCGGGGACGAGTTCGAGGCGATGATGGGCGCCGAGGGCGTGAAGAAGCTGCTCGAGGAGCTGGACATCGAGGCGGAGATCGAGAAGATCCGCGGCGACATGACCGGCTCGGAGCTGAAGATCAAGAAGAACTCCAAGCGCCTGAAGGTGCTCGAGGCGTTCAAGAAGAGCGGCATCAAGCCCAACTGGATGGTGCTCGAGGTGCTGCCGGTGCTGCCGCCGGACCTGCGTCCGCTCGTTCCCCTGGACGGCGGCCGCTTCGCCACGAGCGACCTGAACGACCTCTACCGCCGCGTCATCAACCGCAACAACCGCCTGGCCAGGCTGCTCGAGCTGAAGGCGCCCGAGATCATCGTGCGCAACGAGAAGCGCATGCTGCAGGAGGCGGTCGATTCGCTGCTGGACAACGGCCGCCGCGGCAAGGCGATGACCGGCGCCAACAAGCGCGCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGAGCGGCCGCTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTACTCCGGCCGCTCGGTCATCGTCGTCGGCCCGACGCTCAAGCTGCACCAGTGCGGCCTGCCCAAGCTGATGGCGATCGAGCTCTTCAAGCCCTTCATCTTCAGCCGGCTGGAGGCGATGGGCATCGCCACCACGATCAAGGCGGCGAAGAAGGAGGTCGAGGCCGGCACGCCGGTGGTGTGGGACATCCTCGAGGAGGTGATCAAGGAGCACCCGGTGCTGCTCAACCGGGCGCCGACGCTGCACCGCCTGGGCATCCAGGCCTTCGAGCCGGTGCTCATCGAGGGCAAGGCGATCCAGCTGCATCCGCTGGTCTGTTCGGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTGTCGATCGAGGCGCAGATGGAAGCCCGCACGCTCATGCTGGCGACCAACAACGTGCTCTTCCCGGCCAACGGCGAGCCGTCCATCGTCCCCAGCCAGGACGTCGTGCTGGGCTTGTACTACGCCACGCGCGAGCGCACCAACGGCCGCGGCGAGGGCATGATCTTCGCCGACCTCGCCGAGCTGCAGCGCGCGCTGGACAATGGCGCGGTCGAGATCACCGCGCGCATCAGCGTGCGCCTGACCGAATGGGTCAAGGACAAGGTGAGCGGTGAGCTGGCGGCCGAGACCAGGCTGGTCGACACCACCGTCGGCCGCGCCCTGCTCTCCGAGATCCTGCCCAAGGGCCTGCCCTTCGCGCTGCTCAACAAGGCGCTGAAGAAGAAGGAGATCTCGCGCCTCATCAACGCCAGCTTCCGCCGCTGCGGCCTGAAGGACACGGTCGTCTTCGCCGACAAGCTGCTGCAGTCGGGCTTCCGGCTGGCCACGCGCGCGGGCATCTCGATCTCCATCGACGACATGCTCGTGCCCAAGGAGAAGCCCGGCCTGATCGAGCGCGCCGAACGCGAGGTCAAGGAGATCGAGCAGCAGTACGTCTCGGGCCTGGTGACGGCCGGCGAGCGCTACAACAAGGTCGTCGACATCTGGGGCAAGACCGGTGACGAGGTGGGCAAGGTCATGATGACCCAGCTCTCCAAGCAGAAGGTGCTCGACCGCCACGGCAAGGAGGTCGATCAGGAGTCGTTCAACTCCATCTACATGATGGCCGACTCCGGCGCCCGCGGCTCGGCGGCGCAGATCCGCCAGCTCGCCGGCATGCGTGGCCTGATGGCCAAGCCCGACGGCTCGATCATCGAGACGCCGATCACCGCCAACTTCCGCGAGGGCCTGAACGTCCTGCAGTACTTCATCTCCACGCACGGCGCCCGCAAGGGGCTGGCGGATACGGCGCTGAAGACGGCCAACTCCGGCTACCTCACGCGGCGCCTGGTCGACGTGACGCAGGATCTGGTGGTCACCGAGGACGACTGCGGCACCAGCAACGGCATGAACATGCGCGCGCTGGTCGAAGGCGGCGAGGTGATCGAGTCGCTGCGCGACCGCGTGCTCGGCCGCGTCACCGCGATCGAGGTCCTGCACCCCGAGACGCAGGAGTTGCTGCTGGGCGCCGGCGAGATGCTCGACGAGATCGCGCTCGACGCGCTCGAGGCCGCCGGCGTCGACGAAGTGAAGGTGCGTACGCCGCTGTCCTGCGACACGCGCTTCGGCCTGTGTGCCAAGTGCTACGGCCGCGACCTTGGCCGCGGCGGCCTGGTCAACGCCGGCGAGGCGATCGGTGTCATCGCCGCGCAGTCGATCGGCGAGCCGGGAACGCAGCTCACGATGCGGACCTTCCACATCGGCGGCGCGGCGTCGCGTGCGGCGGTGGCCAGCGGCGTCGAAGCCAAGAGCGACGGCATCATCGGCTTCAACGCCACGATGCGCTACGTCACCAACGGCAAGGGCGAGCTGGTGGTGATCTCGCGCTCCGGCGAGATCGTCATCTCCGATCCGCACGGCCGCGAGCGCGAGCGCCACCGCCTGCCCTACGGCGCCACGCTGCACATCAAGCCCGACCAGCAGGTCAAGGCCGGCGCCGCGCTGGCGAACTGGGATCCGCTGACGCGCCCGATCATCACCGAATTCGCGGGTGAGGCGCGCTTCGAGAACGTCGAGGAAGGCGTCACCGTCGCCAAGCAGGTCGACGAGATCACCGGCCTGTCGACGCTGGTGGTGATCGACCCCAAGCGCCGCGGTTCGACCAAGGTCGTGCGCCCGCAGGTCAAGCTGGTGGATGCCGGCGGCAAGGAAGTCAAGATCCCCGGCACCGACCACACGGTGACGATCGGCTTCCCCGTGGGCTCGCTGATCCAGGTGCGCGACGGCCAGCACCTCGCGCCCGGCGAGGTGCTGGCGCGCATCCCGATGGAAGGCCAGAAGACGCGCGACATCACGGGCGGTCTGCCGCGCGTGGCCGAGCTCTTCGAGGCGCGCTCGCCCAAGGATGCCGGCACGCTGGCCGAAATCACCGGCACGGTGAGCTTCGGCAAGGAAACCAAGGGCAAGGTGCGGCTGCAGATCACCGACCCCGACGGCAAGGTCTACGAGGAACTGGTACCCAAGGAGAAGAACATCCTCGTGCACGAGGGCCAGGTCGTCAACCGCGGCGAGCTCATCGTCGACGGCGCGGCCGACCCGCAGGACATCCTGCGCCTGCTGGGGATCGAGGAGCTGGCGCGCTACATCGTCGACGAGGTGCAGGATGTCTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTCATCGTGCGCCAGATGCTGCGCCGCGTGCAGATCGTCGACCCGGGCGAGAGCAGCTACATCGCCGGCGAGCAGGTGGAGCGCTCGGAGCTGCTCAACACCAATGAACGCCTGCGCGGCGAGGGCAAGATCCCCGCCACGCACGCCGACGTGCTGCTGGGCATCACCAAGGCGAGCCTCTCCACCGATTCCTTCATCTCCGCGGCTTCGTTCCAGGAGACCACCCGCGTGCTCACCGAGGCGGCGATCATGGGCAAGCGCGACGAGTTGCGCGGCCTGAAGGAGAACGTCATCGTCGGGCGCCTGATCCCCGCGGGCACCGGCATGGCCTTCCACCAGGCGCGCAAGGCCAAGGAAGAGATGGACGAGAGCGAGCGTCGCGCCATCGCGTTGCAGGAGGCCGAGGAGCTCGCCGCGGTGCAGCTAGCGCACGTCGATGCCGCCTCTGCAGCCGAGGCCGCGCCCGGCGAGGGCGCCGTCGACTGA
PROTEIN sequence
Length: 1414
MKGLLGLLNQFTPEEHFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDFEAKHAEFGDEFEAMMGAEGVKKLLEELDIEAEIEKIRGDMTGSELKIKKNSKRLKVLEAFKKSGIKPNWMVLEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLARLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKLMAIELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSIEAQMEARTLMLATNNVLFPANGEPSIVPSQDVVLGLYYATRERTNGRGEGMIFADLAELQRALDNGAVEITARISVRLTEWVKDKVSGELAAETRLVDTTVGRALLSEILPKGLPFALLNKALKKKEISRLINASFRRCGLKDTVVFADKLLQSGFRLATRAGISISIDDMLVPKEKPGLIERAEREVKEIEQQYVSGLVTAGERYNKVVDIWGKTGDEVGKVMMTQLSKQKVLDRHGKEVDQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTSNGMNMRALVEGGEVIESLRDRVLGRVTAIEVLHPETQELLLGAGEMLDEIALDALEAAGVDEVKVRTPLSCDTRFGLCAKCYGRDLGRGGLVNAGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASGVEAKSDGIIGFNATMRYVTNGKGELVVISRSGEIVISDPHGRERERHRLPYGATLHIKPDQQVKAGAALANWDPLTRPIITEFAGEARFENVEEGVTVAKQVDEITGLSTLVVIDPKRRGSTKVVRPQVKLVDAGGKEVKIPGTDHTVTIGFPVGSLIQVRDGQHLAPGEVLARIPMEGQKTRDITGGLPRVAELFEARSPKDAGTLAEITGTVSFGKETKGKVRLQITDPDGKVYEELVPKEKNILVHEGQVVNRGELIVDGAADPQDILRLLGIEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVQIVDPGESSYIAGEQVERSELLNTNERLRGEGKIPATHADVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAFHQARKAKEEMDESERRAIALQEAEELAAVQLAHVDAASAAEAAPGEGAVD*