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cn_combo_scaffold_81_fixed_9

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 10114..11121

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding HTH domain-containing protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MBX4_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 330.0
  • Bit_score: 172
  • Evalue 6.30e-40
DNA-binding HTH domain-containing protein {ECO:0000313|EMBL:ELS25061.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 34.2
  • Coverage: 330.0
  • Bit_score: 172
  • Evalue 8.80e-40
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 313.0
  • Bit_score: 163
  • Evalue 1.40e-37

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGCGTGCGCAGCCGATCGTTCCTGGCGTCGATGATGTGCCCGACGGCTTTGCCGTATCGGCGTCGCTGCTGACGCTGTACCGGGCGGCGTGTCAACCCGACATCACCGCGTTCCAGGCCACCGCGCTGCGTCATCTGCAGGGACACGTGGCATTCGACGGCAGCATCTGGGGGGCAGGCACCAGCGAGGGCAGTCGCCTGAATCACGCGCATGTCTGGCAGCTCGATGTCGGCATCCTCGATCTGATCAATGCCGATCCCGAACACAATATCGTGAAGTGCCGTTGCTGCACCGAACTAGGCGTCGGTCATCGGTTCGACGGCGCGATGCTGCGCTCCCATCGGTCGTCGGCCTGGATGCCCGAGCGGTACGGATTCGAACAGGTGCTGGCGATCGTCACTGTCGATCCGGTATCGAAGCTGCTGGGGAGCATGGGGCTGGTGCGGCGGCATGCCCGGCCTGCCTTCACCGACCGGGATCGCCGCTGGCTCGAACTGCTGATGCCGCATCTGCAGGAGATGCTGAACCTGAGCCGCCTGTCGCACTTGCTGGATGTTCGCGGGCGACGCCTGCCTGTGCAGGAGCGGATGGCGATCACGGACGCGCGCGGCGTGCTGCACATCGTGGAGCCGGGCTTCGCCGAAATGATGCGCGAGGAATGGCCGGACTGGATCGGTCCGCGGCTTCCCGCCTGTCTGCAGGCGCTGCCAGGCGAGACGCATGTCCGGCGTCAGGTCGGCACTTCGCTGCAGGTGCAGATCGAAGGCGTGGCCGAAAAGCTGCTCGTGCGGTTGCGTCGGCGCAGTCCGCTCGAAGTCCTCAGCCCCCAGGAGCGCGCCGTCTCTACGGCCTACGCCCGCGGGCAATCGCACAAGGAGGTGGCGCGCGCGCTGGGTCTGTCTCCCGCCACGGTGCGCCATCACCTGCGCCGCGTCTACGCGAAGCTGTGCGTCGACGACAAGGCGGCGCTGGCGCAGCGGCTGGGCGACCCCGTCTTCGCCGACTGA
PROTEIN sequence
Length: 336
MRAQPIVPGVDDVPDGFAVSASLLTLYRAACQPDITAFQATALRHLQGHVAFDGSIWGAGTSEGSRLNHAHVWQLDVGILDLINADPEHNIVKCRCCTELGVGHRFDGAMLRSHRSSAWMPERYGFEQVLAIVTVDPVSKLLGSMGLVRRHARPAFTDRDRRWLELLMPHLQEMLNLSRLSHLLDVRGRRLPVQERMAITDARGVLHIVEPGFAEMMREEWPDWIGPRLPACLQALPGETHVRRQVGTSLQVQIEGVAEKLLVRLRRRSPLEVLSPQERAVSTAYARGQSHKEVARALGLSPATVRHHLRRVYAKLCVDDKAALAQRLGDPVFAD*