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cn_combo_scaffold_81_fixed_15

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(19735..20661)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EC83_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 303.0
  • Bit_score: 365
  • Evalue 4.60e-98
Nodulation protein D I {ECO:0000313|EMBL:KEA63076.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 301.0
  • Bit_score: 375
  • Evalue 6.30e-101
nodD; transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 304.0
  • Bit_score: 364
  • Evalue 2.20e-98
  • rbh

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Taxonomy

Marinobacterium sp. AK27 → Marinobacterium → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGCGCTTCAACCGCCTCGACCTCAACCTGCTGATCGCGCTCGATTCGCTGCTGCGCGAGCGCAGCATCACGCGCGCCGCCGAACGCCTGAACCTCACGCCGTCGGCCGTGAGCAGCGCTCTGGCGCGGCTGCGCCAGTACTTCGACGACGAGCTGCTGGTGCAGGTCGGCCGCCGGATGGAGCCGACGCCGCGGGCGGAAGGCCTGCACGACGCCGTGCGCGACGTGCTCGTGCGCATCGACAGCACGATCGCGAGCCAGCCGCGGTTCGACCCGGCCTCCTCGGACCGCACGTTCCGCATCTTCCTGTCGGACTACATGCAGTTCGTGCTCGTGCCGCACCTGCTCGCGCTGGTGGCCGAACAGCGCTGCACCGCGCGCTTCGAGTTCCTGCCGCAGGTCTCCAACCCGCAGCGCAGCCTCGAGCGCGGAGAGGCCGACCTGTTGATCATTCCGCGCGGATTCCTGTCGCCCGACCACCCCGAGGAGGTCCTCTACGAGGAGGGCTTCGTCTGCGTCGTGTGGCGCGACAGCCCGCTGGCGCAGGGCGAGCTGACGTTCGAGCGTTACCTCGCGGCCGGGCACGTCGTCATGCAGCCGCCCACGGGCACCGGCGAGGCCTTCGAGGCCTGGTTCGTCAGGCGCTACGGCGTCGCGCGCAACGTCGCCGTCACGACCTACGGCTTCGCGCCGCTGGTCGCGCTGGTGTGCGGCACCGACCACATCGCCACGGTGCACGCCCGGCTGGCCCGCATTCTTGCCGCAGCGTGGCCGGTTGCGATCAAGCCGCCGCCGCTGCCGATCGAGCGCATGGAACAGGCCGTGCAGTGGCACAAGTACCGCACCCAGGATCCGGGGCTGGCATGGCTGCGCGACCTGCTGCGGCAAGCCGTTCGGCGCATGGACGCGGGCACGTGGTCCGACTGA
PROTEIN sequence
Length: 309
MRFNRLDLNLLIALDSLLRERSITRAAERLNLTPSAVSSALARLRQYFDDELLVQVGRRMEPTPRAEGLHDAVRDVLVRIDSTIASQPRFDPASSDRTFRIFLSDYMQFVLVPHLLALVAEQRCTARFEFLPQVSNPQRSLERGEADLLIIPRGFLSPDHPEEVLYEEGFVCVVWRDSPLAQGELTFERYLAAGHVVMQPPTGTGEAFEAWFVRRYGVARNVAVTTYGFAPLVALVCGTDHIATVHARLARILAAAWPVAIKPPPLPIERMEQAVQWHKYRTQDPGLAWLRDLLRQAVRRMDAGTWSD*