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cn_combo_scaffold_81_fixed_108

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(115200..116378)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222T2_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 382.0
  • Bit_score: 633
  • Evalue 1.50e-178
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 382.0
  • Bit_score: 633
  • Evalue 4.30e-179
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 382.0
  • Bit_score: 633
  • Evalue 4.30e-179

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Taxonomy

Rhodoferax ferrireducens → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGTCCATGCATCGTCACACCCCGCTTGCCCTTGCCGCCCTACTGGCCACCGCCCTTGCCGCCGGGCCGGCGTCAGCCCAGAACAGCGGCAAGCTGCGCGTGGGCCTGATGCTGCCCTACAGCGGAACCTATTCGGCGCTCGGCAACGCGATCGAGAACGGCTTCCGGCTCTACGTCGCAGAGAAGGGCGGCACGCTCGGCGGGCGGGAAATCGAGTACTTCAAGGTCGATGACGAATCCGATCCGGCCAAGGCCGTCGACAACGTCAACAAGCTCATCAAGCGCGACAACGTCGACGTGCTGATCGGCACCGTGCACTCGGGCGTCGCGATGGGCATGGCCAAGGTCGCCAAGGAGACCGGTACGCTGATGATCGACCCCAACGCCGGGGCCGACGCCGTCACCGGCCCGATGTGCGCACAGAACATCTTCCGCAGCTCGTTCTCGAACTGGCAGCCCGGGTACGCGATGGGTGCCGTGATGGCCAAGCGCGGTCACAAGAACGCCGTCACCATCACATGGAAGTACGCCGCCGGCGACGAGTCGGTCAACGGCTTCAAGGAGGCCTTCACCAAGGCCGGCGGCAAGGTGGTGAAGGATCTGACACTGCCCTTCCCCAACGTCGAGTTCCAGGCCCTGCTGACCGAGATCGCGGCGCTCAAGCCGGACGCCGTCTACACCTTCTTCGCCGGCGGCGGCGCGGTCAAGTTCGTCAAGGACTATGCCGCTGCGGGCCTCAAGGAGAAGATTCCGCTCTACGGCGCCGGCTTCCTGACCGACGGCACGCTCGAGGCCCAGGGCGCGGCGGCCGACGGACTGATGACCACGCTGCACTACGCCGACGCACTGAATACGCCGCGCGACAACCGCTTCCGTCTGGAATATGCCAAGACGTACAAGCTGCAGCCCGACGTCTACGCCGTGCAGGGCTATGACGCGGCACAGATGCTGGGCATCGGCCTGGCTGCCGTCCGCGGCGACGTCTCCAAGAAGGCCGAGTTCGCGGCCGCGCTGAAGAAGGCGCGCATCGACAGCCCGCGCGGCCCGTTCACGCTCTCCTCCAGCCACAACCCGGTGCAGGACATCTACCTGCGCAAGGTCGACAGCAAGGAGAACAAGCTCGTGGAGATCGCCTCCAAGGCGCTGGCCGACCCCGGGCGCGGGTGCCGCATGCAGTAG
PROTEIN sequence
Length: 393
MSMHRHTPLALAALLATALAAGPASAQNSGKLRVGLMLPYSGTYSALGNAIENGFRLYVAEKGGTLGGREIEYFKVDDESDPAKAVDNVNKLIKRDNVDVLIGTVHSGVAMGMAKVAKETGTLMIDPNAGADAVTGPMCAQNIFRSSFSNWQPGYAMGAVMAKRGHKNAVTITWKYAAGDESVNGFKEAFTKAGGKVVKDLTLPFPNVEFQALLTEIAALKPDAVYTFFAGGGAVKFVKDYAAAGLKEKIPLYGAGFLTDGTLEAQGAAADGLMTTLHYADALNTPRDNRFRLEYAKTYKLQPDVYAVQGYDAAQMLGIGLAAVRGDVSKKAEFAAALKKARIDSPRGPFTLSSSHNPVQDIYLRKVDSKENKLVEIASKALADPGRGCRMQ*