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SCN18_25_8_15_R4_B_scaffold_71_52

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(48665..49339)

Top 3 Functional Annotations

Value Algorithm Source
Two-component system, OmpR family, response regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IM78_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 223.0
  • Bit_score: 327
  • Evalue 6.00e-87
two-component system OmpR family response regulator similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 223.0
  • Bit_score: 327
  • Evalue 1.70e-87
Two-component system, OmpR family, response regulator {ECO:0000313|EMBL:CCA92530.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 223.0
  • Bit_score: 327
  • Evalue 8.30e-87

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GTGCTGCGCATCCTGCTCGCCGAGGACGACGCCGAAACCCGCCAGTTCGTGGAACGCGGGTTGCGCGAGTACGGCCACAACGTCCTCGCCGCCGAGCGCGGCGAGGATGCCCTGCATCTTGGCCTGACCGAGGCGCTGGACGTGATCGTGCTCGACCGCATGCTGCCGGGGCTGGACGGCCTGGGCGTGCTCAAGCGCCTGCGCGCGGCCGATGTCGGCACGCCGGTGCTGATGCTGACCGCACTCGGGCGGATCGAAGACCGCGTGAGCGGCCTGCAGGCCGGCGCCGACGACTACCTGGTCAAGCCGTTCGCCTTCAGCGAGCTGGCCGCGCGGGTGCAGGCGCTGGCGCGCCGGCGCGCGCCCGCCAGCGTCGCCACCGTGCTGCAGGCGGGCGGGATCGAGATGGACCTGCTGCGGCGCGAGGTGCGCCGCGCGGGCCGCCCGATCGCCCTGCAACCGCGCGAGTTCCGGCTGCTGGAGGAACTGCTGCGCAATGCCGGCGAAGTCGTGACCCGCAGCATGCTGCTGGAACGGGTATGGGACTTCCACTTCGACCCGCAGACCAAGATCGTGGAAACCCATATGAGCCGCCTGCGCGCCAAACTCAACGACGGTTTCACCGAGGATGCGATCGAAACCGTGCGCGGCGCCGGCTACCGGGTGCGCACATGA
PROTEIN sequence
Length: 225
VLRILLAEDDAETRQFVERGLREYGHNVLAAERGEDALHLGLTEALDVIVLDRMLPGLDGLGVLKRLRAADVGTPVLMLTALGRIEDRVSGLQAGADDYLVKPFAFSELAARVQALARRRAPASVATVLQAGGIEMDLLRREVRRAGRPIALQPREFRLLEELLRNAGEVVTRSMLLERVWDFHFDPQTKIVETHMSRLRAKLNDGFTEDAIETVRGAGYRVRT*