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SCN18_25_8_15_R4_B_scaffold_71_116

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 109863..110654

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 259.0
  • Bit_score: 370
  • Evalue 1.70e-99
tRNA pseudouridine synthase A n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039CDE41 similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 259.0
  • Bit_score: 367
  • Evalue 1.00e-98
tRNA pseudouridine(38-40) synthase similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 259.0
  • Bit_score: 364
  • Evalue 1.90e-98

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGCGGCTGGCACTGGGCGTCGAGTACGACGGCAGCGGGTTTTCGGGGTGGCAGCGGCTGAGCCAGGCCGGCGCGCTGGAACCGGACGGCAGCCTGCAGACCGCACTGGAGATCGCGCTGTCGAAGGTCGCCAATACTCGCATCGATACCATCTGCGCGGGTCGCACCGATGCCGGCGTGCACGCGCGCTGCCAGGTGGTGCATTTCGATACCGAGGCCACGCGCGACGCGCGCGGCTGGGTGCTGGGCGCCACCGCCAACCTGCCGCCGACGATGGCGGTGCGCTGGTGCGTGCCGGTGGCCAACGACTTCAACGCGCGCTTCTCCGCCGTCGCCCGCCGCTACCGCTACCGCATCCTCAACCGCAGCGCGCGGCCCGGGCTGGAGCGCCAGTACCTGGGCTGGGAGCGCATGCCGCTGGATGCGGCGGCCATGCACCATGCGGCGCAGGCACTGCGCGGGGAACGGGATTTCTCGGCCTTCCGCAGCGTGCAGTGCCAGGCCACCCACGCCCGCCGCCACCTGCAGGAGATTTGCGTGATCCGCACCGGCGACGAGGTGGTGGTGGAAGTGCAGGCCAACGCCTTTTTGCATCATATGGTGCGCAACATCGTCGGCTCGCTGCTGGTGGTGGGGCGCGGCGAGCGCCCGCCGGAGTGGATCGCCGAGCTGCTGGACGGCCGCGACCGCACCGTCGCCGGCCCTACCGCGCCGGCCGCCGGGCTGCTGTTCCTCGGCCCGAAGTACCCGCGCCAGTGGGGCTTGCCGGAAGAGGCTTGCGGCGATGAATGA
PROTEIN sequence
Length: 264
MRLALGVEYDGSGFSGWQRLSQAGALEPDGSLQTALEIALSKVANTRIDTICAGRTDAGVHARCQVVHFDTEATRDARGWVLGATANLPPTMAVRWCVPVANDFNARFSAVARRYRYRILNRSARPGLERQYLGWERMPLDAAAMHHAAQALRGERDFSAFRSVQCQATHARRHLQEICVIRTGDEVVVEVQANAFLHHMVRNIVGSLLVVGRGERPPEWIAELLDGRDRTVAGPTAPAAGLLFLGPKYPRQWGLPEEACGDE*