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SCN18_25_8_15_R4_B_scaffold_273_21

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 9417..9605

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EC3ED0 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 63.0
  • Bit_score: 108
  • Evalue 2.10e-21
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 62.0
  • Bit_score: 111
  • Evalue 2.60e-22
50S ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 63.0
  • Bit_score: 107
  • Evalue 1.30e-21

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
ATGGCTAACGAAGGCAAGACCATCAAGGTTCGCCTGGTCAAGGGCCTGCGCGGCACCCAGTCGCGCCACCGGCTGTCGGTGAAGGCACTCGGCCTCGGCAAGCTCAACAGCGTCCGCGAGCTGAAGGACAGTCCGCAGGTGCGTGGCCTGATCAATCAGCTGCACTACCTGGTGCGGGTGGAGGAGTAA
PROTEIN sequence
Length: 63
MANEGKTIKVRLVKGLRGTQSRHRLSVKALGLGKLNSVRELKDSPQVRGLINQLHYLVRVEE*