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SCN18_25_8_15_R4_B_scaffold_195_5

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(6616..8508)

Top 3 Functional Annotations

Value Algorithm Source
vitamin B12 receptor protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003043AE3 similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 625.0
  • Bit_score: 577
  • Evalue 1.20e-161
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 629.0
  • Bit_score: 570
  • Evalue 4.20e-160
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 626.0
  • Bit_score: 650
  • Evalue 1.60e-183

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1893
ATGCAATCCAAGCTCCACAGACTTCAGCTCGCGGCCCTGCCGCTCGCGCTTGCATCCAGCCTGCCGTTGGCCGCGCATGCCGACGATGCCAAGACCCTCGATCGCGTGGTCGTCACCGCCACCCGCACCCCGACCACGGTGGACGCCGCGCTGGCGGCGGTGGAGGTGATCGACCGCGACCAGATCGACGCCAGCGGCGCGCACTCGCTGCCGGAGCTGCTGCGCGGGCGCGCCGGCATCGACATCGTCAACCAGGGCGGACTGGGCAAACTGAGCACTCTGTTCCTGCGCGGCACCGAATCCGACCACACCCTGTTCCTGGTCGATGGCGTGCGCATCGGCTCGCCCACCTCCGGGCTGGCGTCGATCCAGGACATCCCGTTGGAGTTGATCGAACGCATCGAGATCGTGCGCGGGCCGCGCTCGTCGCTGTACGGCGCGGACGCGATCGGCGGCGTGATCCAGATTTTCACCCGCCGCGACACGGCCCGCGGCACCCATGCGCGCGCGCGGATCGCGGCCGGCAGTCACGGCCTGCGCGAGGCCAGCGCCGGGCTGGATCTGCGCGGCGCGCGCGGCGGCATCGGCGTGGACGTGGCGCACCAGCGCACCGACGGCATCAACGCCTGCACCGGCTATTTCGATCCGCTGACCTGGTACGGCGCCGGCTGCTTCATCGTGCCCGGCACCCACCTCGACCGCGACGGCTACCGCAACCATAGCGCCAGCCTGCGCGCGGACTTCGCGCCGGCCGACGGCTGGCAGCTGGATGCGCACGCCTTCCGCGCCGACGGCCACAACGACTACGACGGCGATTACGTGGACAACTCCGACATCGTCCAGCAGGTGGTCGGCGGCAGCGTGCGCTGGACGCCGGTGGACGCGTTGCAGCTCAAGCTCAGCGCCGGCCGCGATACCGACGACTCCAGCAATTACCTGGGCAAGGTCTTCAGCAACCGCTTCGCCACCCATCGCGACAGCGCCAGCCTGCAGGGCGACCTCACCCTGGCCCGGGGCCAGCGACTGAGCGCGGGCCTGGACTGGCTGCGCGATGCCGCCAACGTCAGCGATCCGTGGGCGCCGTTCGCGCGCACCCGCGGCAACCGCGGCCTGTTCGTGCAGTACCAGGGCGACTCCGCCGTGACCGGCGGTCAGCAGCATCTGCAGCTGGCCCTGCGCCATGACGACAACGACCAGTTCGGCGGCCACACCACCGGCAACCTCGCCTGGGGCCGCGACCTCGGTGGCGGCTGGCGCATCACCGCCAGCCACGGCACCGCGTTCAAGGCGCCCACCTTCAACGAGCTGTACTACCCCGGCTTCAGCAACCCCCTGCTGCGTCCGGAAACCGCGCGCAGCAGCGAGCTGTCGCTGGCACGCAGCGGCGCGGACTGGCGTCTGCAGGCCAACGCCTACCAGACCCGCATCCGCGATCTGATCGCCTACGACGCCACGCTCGGCAAGCCCGCCAACATCGATTCCGCGCGCATCCGCGGGCTGGAGCTGACCGGGCAGGCGCAGTGGGGCGCATGGTCCGCGCGCGGCCAGCTCGGCTGGCTGCAGACCCGCAACGAGAGCCCCGGCAGCAACCACGGACACCTCCTGCCACGCCGTGCGCCGCGCAGCGCGCGCCTGGATCTGGACCGCGAGGCCGGCGCGTGGAGCTTCGGCCTGAGCGGGATCGCGGAGGCCGCGCGCTGGGACGATGTGGCCAACACCCTGCGCGTGGGCGGCTATGCAACGCTGGACGCACGCGTCACCCGCCGGCTCGCACACGGCCTGACGCTGCAGGCGAACGTCAGCAACGCCCTGGACAAGCGCTACCAGACCAGCGCGTACTACCCGCAGCCGGGGCGCGAATACACCCTGAGCCTGCGCTGGCAGGACGAGTGA
PROTEIN sequence
Length: 631
MQSKLHRLQLAALPLALASSLPLAAHADDAKTLDRVVVTATRTPTTVDAALAAVEVIDRDQIDASGAHSLPELLRGRAGIDIVNQGGLGKLSTLFLRGTESDHTLFLVDGVRIGSPTSGLASIQDIPLELIERIEIVRGPRSSLYGADAIGGVIQIFTRRDTARGTHARARIAAGSHGLREASAGLDLRGARGGIGVDVAHQRTDGINACTGYFDPLTWYGAGCFIVPGTHLDRDGYRNHSASLRADFAPADGWQLDAHAFRADGHNDYDGDYVDNSDIVQQVVGGSVRWTPVDALQLKLSAGRDTDDSSNYLGKVFSNRFATHRDSASLQGDLTLARGQRLSAGLDWLRDAANVSDPWAPFARTRGNRGLFVQYQGDSAVTGGQQHLQLALRHDDNDQFGGHTTGNLAWGRDLGGGWRITASHGTAFKAPTFNELYYPGFSNPLLRPETARSSELSLARSGADWRLQANAYQTRIRDLIAYDATLGKPANIDSARIRGLELTGQAQWGAWSARGQLGWLQTRNESPGSNHGHLLPRRAPRSARLDLDREAGAWSFGLSGIAEAARWDDVANTLRVGGYATLDARVTRRLAHGLTLQANVSNALDKRYQTSAYYPQPGREYTLSLRWQDE*