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SCN18_25_8_15_R4_B_scaffold_195_35

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(43684..43944)

Top 3 Functional Annotations

Value Algorithm Source
Global DNA-binding transcriptional dual regulator Fis n=2 Tax=Xanthomonas campestris pv. translucens RepID=L7GFQ8_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 90.0
  • Bit_score: 137
  • Evalue 4.40e-30
DNA-binding protein Fis {ECO:0000313|EMBL:KGQ18239.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 89.0
  • Bit_score: 142
  • Evalue 1.90e-31
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 90.0
  • Bit_score: 136
  • Evalue 2.80e-30

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
TTGAACGCATCCAGCCATCGCCAGGACACCGGCCGCGCGCCGCTGCGCGAGCACGTCGCCCACTCGGTGCGCCGCTACCTGCAGGACCTGGACGGCTGCGACACCGACGACCTGTACAACACCGCGCTGCGCGAACTGGAAATCCCGCTGTTCACCGAGGTCCTGCGCCACTGCGACGGCAACCAGAGCCGCGCCGCCGCGATGCTGGGCATCCACCGCGCCACCTTGCGCAAGAAGCTGCGCGAGTACGGGCTGGCCTGA
PROTEIN sequence
Length: 87
LNASSHRQDTGRAPLREHVAHSVRRYLQDLDGCDTDDLYNTALRELEIPLFTEVLRHCDGNQSRAAAMLGIHRATLRKKLREYGLA*