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SCN18_25_1_16_R1_B_scaffold_3752_5

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(2077..3399)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 440.0
  • Bit_score: 871
  • Evalue 3.00e-250
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUD4_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 435.0
  • Bit_score: 746
  • Evalue 1.10e-212
Ribosomal protein S12p methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 440.0
  • Bit_score: 871
  • Evalue 6.10e-251

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGACCCAATCCCCCCGTGTCGGTTTCGTCAGCCTGGGCTGTCCCAAGGCCCTGGTCGACTCTGAGCGCATCCTGACCCAGCTGCGCACCGACGGCTACACCATCAGTCCCGACTACGAAGGGGCCGACGTCGTCGTGGTGAACACGTGCGGCTTCATCGACAGCGCCAAGGCCGAATCCCTGGACGCCATCGGCGAGGCCATCGTCGAGAACGGCAAGGTCATCGTCACCGGCTGCCTGGGCGTGGAGGCCGACATGATCCGCACCGTGCATCCGGCGGTGCTGGCCGTCACCGGGCCCCAGCAGTACGAGCAGGTGGTGCGCGCCGTGCACGAGGCCGCCCCGCACGAGCGTTCGCACGACCCCTACGTGGACCTGGTGCCGCCCCAGGGCATCCGCCTGACGCCGCGCCACTACGCCTACCTGAAGATCTCCGAAGGCTGCAACCACAACTGCAGCTTCTGCATCATCCCGTCCATGCGCGGCCGTCTGGTCAGCCGTCCGATCGGCGACGTGCTGGGCGAGGCCCGCCGCCTGGTGGACGCTGGCGTGAAGGAACTGCTGGTGATCTCCCAGGACACCAGCGCCTACGGGGTGGACGTCAAGTACCGCACCGGCTTCTGGGACGGCCGCCCGGTCAAGACGCAGCTGACGGCGCTGGCGCGCGCCCTGGGGGAATTCGGCGTCTGGGTGCGCATGCACTACGTCTATCCCTATCCCCACGTGGACGAGCTGATCCCCCTGATGGCCGAAGGCCGCATCCTGCCCTACCTGGACATTCCCTTCCAGCACGCCAGCCCGCGCATCCTGAAGGCCATGAAACGCCCCGCTTTCGAGGACCGCACCCTGGCCCGCATCCGCCAGTGGCGCGAGGCCTGTCCGGACCTGACCCTGAGGTCCACCTTCATCGTCGGCTTCCCCGGCGAGACGGAGGAGGACTTCCAGTACCTGCTGGACTGGATGACCGAAGCCCAGCTCGACCGCGTCGGCTGTTTCCAATATTCGCCCGTGGAGGGCGCGCGCGCCAACGAGCTGCCCGATCCTGTGCCCGACGAGGTCAAGGCCGAACGCTGGGAGCGCTTCATGGCGCACCAGCAGGCGATCTCCACGCGGCGCCTGGCGGCGAAAGTCGGCCGCACCCTGACGGTGCTGGTGGACGAGGTCGACGAGGACGGCGGCGCCACCGCGCGTTCCATGGCCGACGCGCCGGAAATCGACGGCAGCGTGCTGCTGCGCGACGCCGCCGGCCGCGCGCCGGGCGACCTGATTCAGGTGAGGATCGAGGACGCGGATGAATACGACCTGTACGGCGTGCCGGTCTGA
PROTEIN sequence
Length: 441
MTQSPRVGFVSLGCPKALVDSERILTQLRTDGYTISPDYEGADVVVVNTCGFIDSAKAESLDAIGEAIVENGKVIVTGCLGVEADMIRTVHPAVLAVTGPQQYEQVVRAVHEAAPHERSHDPYVDLVPPQGIRLTPRHYAYLKISEGCNHNCSFCIIPSMRGRLVSRPIGDVLGEARRLVDAGVKELLVISQDTSAYGVDVKYRTGFWDGRPVKTQLTALARALGEFGVWVRMHYVYPYPHVDELIPLMAEGRILPYLDIPFQHASPRILKAMKRPAFEDRTLARIRQWREACPDLTLRSTFIVGFPGETEEDFQYLLDWMTEAQLDRVGCFQYSPVEGARANELPDPVPDEVKAERWERFMAHQQAISTRRLAAKVGRTLTVLVDEVDEDGGATARSMADAPEIDGSVLLRDAAGRAPGDLIQVRIEDADEYDLYGVPV*