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SCN18_25_1_16_R1_B_scaffold_3855_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(1234..1524)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WRZ6_VEREI similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 96.0
  • Bit_score: 167
  • Evalue 5.80e-39
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 96.0
  • Bit_score: 181
  • Evalue 1.10e-43
DNA-binding protein {ECO:0000313|EMBL:AIJ46682.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 96.0
  • Bit_score: 181
  • Evalue 5.40e-43

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGGATGCGGTGCATGAAGGCGCCCGCGACCTGCATCGTCTGGGGTTCATCGACAAGCGCAAGATGCAGAAGTACGACCTGCTGTGCCTGGAACCGGTGCGGGACTACGATGCCGCCAGGATCAAGGCGCTGCGTGAGCGCCTGCAACTGAGTCAGGCCGTTCTGGCCTCGGTCCTCAATACCAGCCCGTCCACCATCCGAAAATGGGAAGTGGGCGACAAGCGCCCCAGCGGCCCGTCGCGAAAGCTGCTTGATCTCATCGAGCGCAAAGGACTGGAAGCCGTGCTCTGA
PROTEIN sequence
Length: 97
MDAVHEGARDLHRLGFIDKRKMQKYDLLCLEPVRDYDAARIKALRERLQLSQAVLASVLNTSPSTIRKWEVGDKRPSGPSRKLLDLIERKGLEAVL*