ggKbase home page

SCN18_25_1_16_R1_B_scaffold_6536_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 2..316

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F71DCE similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 103.0
  • Bit_score: 142
  • Evalue 2.10e-31
Transcriptional activator MetR similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 104.0
  • Bit_score: 203
  • Evalue 2.90e-50
Transcriptional activator MetR {ECO:0000313|EMBL:CDM24359.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 104.0
  • Bit_score: 203
  • Evalue 1.40e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
CGGCTGGACGTCTATACGGCCTTCCTGGATCCGGCCGGCATCGAGCCGGCCGCCGTGCGCACGGCGGAACTGACCCCCATGATCGTGCAGCTCGTCGCCAGCGGCCGGGGCGTGGCGGCGCTGCCCAGTTGGGCGCTGGACGAATACAGGAACCTGCCGGGACTGAAAATCTGCCGGCTGGGGTCGGGGATCTGGCGCACGCTGCAGGCCGGCATCCGCGCCGAAGACGCTGAAACCGCCTATGTCCAGGCTTTCCTGGAACAGGCGCGGCGCACGTGTTTCGAGACCCTGCCGGGCATCCGGGCGCCGGGCTGA
PROTEIN sequence
Length: 105
RLDVYTAFLDPAGIEPAAVRTAELTPMIVQLVASGRGVAALPSWALDEYRNLPGLKICRLGSGIWRTLQAGIRAEDAETAYVQAFLEQARRTCFETLPGIRAPG*