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SCN18_25_1_16_R1_B_scaffold_8499_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 722..1432

Top 3 Functional Annotations

Value Algorithm Source
Histidine/lysine/arginine/ornithine ABC transporter permease HisM n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B8U0_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 231.0
  • Bit_score: 340
  • Evalue 9.30e-91
Histidine ABC transporter, permease protein HisM similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 236.0
  • Bit_score: 444
  • Evalue 1.70e-122
Histidine ABC transporter, permease protein HisM {ECO:0000313|EMBL:CDM24985.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 236.0
  • Bit_score: 444
  • Evalue 8.40e-122

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGACCGACGTGCTCGAACAATTCTGGCGCGCCTACCTGTATGCCAGCAACGGCAGCCCGTCGGGCATGGCCGTCACCCTCTGGCTGCTGGTGCTGTCGGTGTCGATGGGCTTCTTCATCTCGATCGGCCTGGCCGTGGCCCGCGTATCCTCGCGCCGCTGGCTGTCGATCCCGCTGTGGCTCTTCAGCTACGTGTTCCGCGGCACGCCGCTGTACGTGCAGATCCTGTTCATCTACGCCGGCATCTACAGCCTGGAATTCGTCAAGGGAACCCCCGCCCTGGCGGCGTTCTTCCAGAGCGGCTTCAATTGCCTGGTGCTGGCCCTGACGCTGAACACGGTCGCCTACACGACCGAAATCTTCGCCGGCGCCATCCGCGCCACCAGCGCGGGCGAGATCGAGGCCGCGCGCGCCTACGGCATGACGCGCTTCGCGATGTACCGCCGGGTGATCCTGCCGTCGGCCCTGCGCCGCGCGCTGCCGGCCTACAGCAACGAGGTCATCCTGATGCTGCACGCCACGTCCCTGGCCTTCACCGCCACCGTGCCCGACATCCTCAAGATCGCCCGCGACGCCAATTCGGCCACCTACCAGACCTTCGCCTCCTACGGGCTCGCCGCCCTGCTCTATCTGTGCCTGTCGTTTACACTGATCGGGCTGTTCCGCCGGTTCGAGCGCCGCACGCTGGCCTACCTGGGCACCCACCGCTGA
PROTEIN sequence
Length: 237
MTDVLEQFWRAYLYASNGSPSGMAVTLWLLVLSVSMGFFISIGLAVARVSSRRWLSIPLWLFSYVFRGTPLYVQILFIYAGIYSLEFVKGTPALAAFFQSGFNCLVLALTLNTVAYTTEIFAGAIRATSAGEIEAARAYGMTRFAMYRRVILPSALRRALPAYSNEVILMLHATSLAFTATVPDILKIARDANSATYQTFASYGLAALLYLCLSFTLIGLFRRFERRTLAYLGTHR*