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SCN18_25_1_16_R1_B_scaffold_11380_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(9..743)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601, ECO:0000313|EMBL:CDM25505.1}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 247.0
  • Bit_score: 446
  • Evalue 2.30e-122
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U4N7_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 243.0
  • Bit_score: 293
  • Evalue 1.80e-76
Ribosomal RNA small subunit methyltransferase E similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 247.0
  • Bit_score: 446
  • Evalue 4.60e-123

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGGTCATTGCCATGCCGCCTCCCCGCTTCTTCTGCGAGACACCGCTGGATGCCGGCCGGCGCGTCGAGCTGCCGGACGCCCTGGCGCATCACGCGCTGCGCGTGCTGCGGCTCGCGGACGGCGCCCCCATCGGCCTGTTCGACGGCCGGGGCGGCCAGTATCCCGCCACGCTGCGGGCCGAAGGCCGGCGCGCCCTGGCCGAACTGGGCGCGCACGAAACCGTCGAAAGCGAACTGCGCGGGCGGCTGGTCCTGATCCAGGGGCTGGCCTCGGGCGACAAGATGGACTGGGTCGTGGAAAAGGCGGTCGAGCTGGGCGTGGCCGAACTGCGCCCCGTCGCCGCCGAGCGCAGCGTCCTGCGCCTGTCCGGCCCCCGGCTGGACAAGCGCCTGGACCATTGGCGCGCCATCGCCCGGGCGGCCTGCGAGCAATGCGGCCGCAACCGGCTGATGGCCGTCCACCCGCCCGCGCCGCTGGCGGCCTGCCTGGAGGCGATCGACGGCCCCGCGCTGTTCTGCCATCCGGACGGCCCCCTGGACTTCCGCGCGGCCCTGTCCGGGGTGCGGGACAGCCTGGCGCTGATGGTCGGCCCCGAGGGCGGCTGGTCGCCGGAGGAACTGGCCCTGGCGCGGCGCCGGGGCCTGCTGGGCGCGCGCTTCGGGACGCGGGTGCTGCGCACCGAGACGGCCGGCCTCGCGCTGGCGGCGGCGGCCACGGCCCTGCTGGACTGGTAG
PROTEIN sequence
Length: 245
MVIAMPPPRFFCETPLDAGRRVELPDALAHHALRVLRLADGAPIGLFDGRGGQYPATLRAEGRRALAELGAHETVESELRGRLVLIQGLASGDKMDWVVEKAVELGVAELRPVAAERSVLRLSGPRLDKRLDHWRAIARAACEQCGRNRLMAVHPPAPLAACLEAIDGPALFCHPDGPLDFRAALSGVRDSLALMVGPEGGWSPEELALARRRGLLGARFGTRVLRTETAGLALAAAATALLDW*