ggKbase home page

SCN18_25_1_16_R1_B_scaffold_9894_1

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 1..1719

Top 3 Functional Annotations

Value Algorithm Source
VCBS repeat-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN37_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 414.0
  • Bit_score: 245
  • Evalue 9.90e-62
Cadherin domain protein {ECO:0000313|EMBL:KGB52625.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 488.0
  • Bit_score: 253
  • Evalue 6.70e-64
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 567.0
  • Bit_score: 222
  • Evalue 2.00e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
CTGGCCGAACTCGTCGCGGCGACGCCGGGCGCGCCCATCGTCATCAATACGGATCGGGGCGTCCTGACCTTGACCGGCTACAACCAGGACACAGGCACGGTCACCTATCGCTACGTGTCCGACGGCTGGCAGGATCACACGGGCGCGGCCACGGACCCGTCCATCGGGGAGTACCTGCCCGATTCCATCGGCGTCACCGTGGTCGATAGCCTGGGCCGTTCCGTCATCAGCGACATCGTCGCGGCCATCACGGATACGGCGCCGGCCGCCGTCTCCGACACGGCCAACGTGACCGAGGATGCCGCCTTGGTCGCCGTGGGGAACGTCGTCAAGGGCGATGGCGAAGCGGGCGATACCGGGCCCGGAGACAATGCCGATGCGCTGGGCGTCGACCCGACCCCCGTATCGGGAGTCCAGGCCGGCGACAGCCTGGGCGCGGACGTCAGCGGTGGCGTGGGCGCCGTCATTCATGGCGCCTATGGCGACCTGATCCTGAATGAAGATGGCTCCTACACCTATACCCTGGTCAGCGATCCGGCCGACGAGCGCCATGCCGCCGTGCAGGCCCTGGGGCAGGACAAGACCGCCAATGATGTTTTCTCCTATACGCTGACCGATGCGGACGGCGATACCTCGACGGCAACCCTGACGGTCGTCGTCAAGGGCGCGAACGACGTGCCGACGATCACCTTCGGTGGCGACAACGGCGCCAACGCGAACGCGGCGGTCTCGGAAGAAGGGCTGCGAGGGGCTCTGTTCCCGTTCCCGCTGCCGCCGCATGGCGATGGCATTCCGGATGGCACCGGCACCTCGGACACGACCAACAGCGCCACGGACGGCGGCACGTTCACGGTCCACGATGCGGACGCGGGCGATGTGCTGACGGTGAAGCTGGGTACGCCGTCCGAAACCCTGACCTCGAACGACCAGACTGTGCATTGGGTGCTGTCCAGCGACGGCCAGACGCTGACAGGCCGGGTGGGCGGCAAACTGGTTGGCGAGGACGTGATCAAGATCACGCTGCACGACAACCATGATGGTTTCTATTCGTACGACGTAAAATTGCTGGCGCCGATCGATCATCCGAATACGAGTATCGAAGACGCTCTGAATGTGGGGGTGCCGATCCTGGTGTCGGATGGCCACACCACGACCACGGGCAATCTGAATGTCAGCATCGAGGACGACAGCCCGCTGGCGGCCAATGACAACGGCGGCACGGTGACCGAGGACGCGCATGGCCATGCCGCGGTCCTGGGGGGCAATGTGCTCCTGAATGACACCGGCTGGGGCGCGGACGGCCCGAACGATCTGCTCGACGGCTTCGCCTGGAACGCCGGCGACAACGCGGCGACGCAGGCCGATTTGTCGCAGTACGGCACGCTGGTGCTGGGTCCCGCCGGAGGTTGGACCTTCGTGCTGGACAGCTCCAAGCCGGCCACGCAGGCGCTGGCTGAAGGCCAGGTCAAGGACTTCGTCCTGAAGTACACGCTGACGGACAATGACGGCGACACGTCGCAAGCCGCGCTGACCATTCACATCAAGGGCACCAACGACGATCCCACGATCACGTTCGGCCAGGATGGCGGTCACGTGGCCGTCTCCGAGGAAGGCCTGACGGCGGCCGGCGGCAACTACGACGACGGTATCGCCGGCCATGGCAATGATCTCCCCAGCGGCGACCAGACCGACAACCCCGCGGCGTCAGGATCATTCACC
PROTEIN sequence
Length: 573
LAELVAATPGAPIVINTDRGVLTLTGYNQDTGTVTYRYVSDGWQDHTGAATDPSIGEYLPDSIGVTVVDSLGRSVISDIVAAITDTAPAAVSDTANVTEDAALVAVGNVVKGDGEAGDTGPGDNADALGVDPTPVSGVQAGDSLGADVSGGVGAVIHGAYGDLILNEDGSYTYTLVSDPADERHAAVQALGQDKTANDVFSYTLTDADGDTSTATLTVVVKGANDVPTITFGGDNGANANAAVSEEGLRGALFPFPLPPHGDGIPDGTGTSDTTNSATDGGTFTVHDADAGDVLTVKLGTPSETLTSNDQTVHWVLSSDGQTLTGRVGGKLVGEDVIKITLHDNHDGFYSYDVKLLAPIDHPNTSIEDALNVGVPILVSDGHTTTTGNLNVSIEDDSPLAANDNGGTVTEDAHGHAAVLGGNVLLNDTGWGADGPNDLLDGFAWNAGDNAATQADLSQYGTLVLGPAGGWTFVLDSSKPATQALAEGQVKDFVLKYTLTDNDGDTSQAALTIHIKGTNDDPTITFGQDGGHVAVSEEGLTAAGGNYDDGIAGHGNDLPSGDQTDNPAASGSFT