ggKbase home page

SCN18_10_11_15_R4_P_scaffold_182_19

Organism: SCN18_10_11_15_R4_P_Sphingobacteriales_45_140

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(17731..21129)

Top 3 Functional Annotations

Value Algorithm Source
pgdA; Peptidoglycan-N-acetylglucosamine deacetylase (EC:3.5.1.104) similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 1133.0
  • Bit_score: 1255
  • Evalue 0.0
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003645262 similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 1135.0
  • Bit_score: 1423
  • Evalue 0.0
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 1130.0
  • Bit_score: 1395
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21 → SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3399
ATGAATAGAGAAACCGCACAAATTTTTCAGACAAACAATGCCTCCCGTTGGCAACGAACCAAATGGGGCAGCCGGCTGGTTCTTTTTTTACTGCTTATTGGCGCTACCGCTTTTGTCATCGCTTATAATTACTCTGCTAACAAACCGCAGCAATTACCTGTTTTTCAGGATGAGATCAAGAAAAAGGTATTGCAGCCCGATAAGCCCACAGAGCCTATCACCAAAGAATACCAGGGCATCCGCAAATTCATCAATGATAAGTGGGCAAAGGGGCTTGGCTGCGGGCAGAACAATCAGGTGATTGACCTTTCCAGTTCGCCATATTTCAACGACAGCGTGGGTATCCGGGCGGCTTTTTACGTAAACTGGGACCCCCAGTCACTCATCTCCCTTCAAAAGAATATTGACAAGATCAATCTCGTAATACCCGAATGGTTTTTCCTGGATACCAAGGGCGACAGCCTGTTGCTGGATATAGACAGGAATGCCCTCGGTATCATGAAAGCAGCGGGTATCAAGATCATGCCGTTGCTCACCAATAACTTTCAGAAGACATGGCATGGTGATGTAGTACACCGCATCATCAATGATCCAGTGAAGAAAAGTAAGCTCATCAACGACATCATACGGGTTTGTAAGATATACGATCTGTCGGGCGTGAACATCGACTTCGAAGCATTGATAGAAGCCAAAAATGAAGTGCTTACCGCTTTCCAGAAAGAACTCTATGAAAAAATGCATGCTGCAGGATTGATGGTATCGCAGGATGTGAGTCCTTTCAACGAAGACTACGACCAGGCGGCATTGGCCAATTACAACGATTACCTGTTCCTGATGGCTTACGATGAACATTCGGCGGACAGCAGGCCGGGCCCCATCAGCAGCCAGCGTTGGGTAGAAAAAGCACTCGATCAGGTTACCAAAAAGATACCACCCGGTAAAGTTGTATTGTGTATGGCCGCGTTTGGATACGACTGGGTGAACGGTGGCGGCTCGGGTTCCACTACCACCCTCGCTTACCGCGATGCGATCACCGTAGCAAGGGAAAGTGAGGGTCAGATACGGTTCGACAACGACACGTATAACCTCAGCTATCTTTATTACGATGAAATCAACGACCTTCACGAAGTGCATTTTACCGATGCAGCCACCAATTTCAATACCCTGCGTTTTGCTACCGAATACCAACTGGCGGGTACGGCCCTGTGGCGGCTGGGGAGTGAAGACCTTCGGCTCTGGCAGTTCTACAACAAATCCATGAACAAAGATGCCCTCCGCCAGTTCGATTTTTCGATCTTCAACAAGATGGCAGGAAGCAACAACGTGGATTATATTGGCAGCGGCGATATCATGAAAGTGATTGCCATGCCCCGCAGTGGTCATATCAGTATCCAAATAGACTCGGCAGCGGGCCTCATTGCAGAAGAAACCTACGATTCACTGCCTTCCATGTTCATGGTAAAACAAATGGGCGCGCCTCAAGGCAAAAAATTAGTGCTCACTTTCGACGACGGGCCAGATCCTAAATACACCGGTAAAGTGCTGGATATTCTTTCACATTACCATGTGCCTGCCGCTTTCTTCCTGGTAGGTATCGAAGCGGAAAAGCATATCCCGTTGGTGCAACGCATCTACCGCGAAGGACATGAAATAGGCAACCACACTTTCACCCATCCTAATATTGCCAAAGTGGGTAAACAGCGGGCCGATCTGGAGATCAATGCCACAAGGCTGCTGATTGAATGCATTACCGGGCACAGCACCATTCTCTTTCGCGCGCCATACAGCGATGCGGATAATGATAACCCGGGCGAGATGGAAGCCTTACTGCCCATCAGCCTTCGCAGAACCAAAGATTACCTCACCATTGGTGAGAACATAGACCCGAAGGACTGGCAAACCGATGCCGACTATACTTTGACAGCCGATACCATTTTCAACAGGGTGGTAAGGCAGAAGGATACCGGCAATATCATCCTGTTGCACGATGCCGGTGGCGACCGCAATGCTACTATTGAAGCATTACCACGCATCATTGAATATTTTCAGAAAAACGGTTATCAGTTTGTGTCCATCGCCAACCTGCTGGGCAGGAAAAAGGATGAAATGATGCCCCCTCTCCCCAAGGGAAGTGGCTACGATCTCATGCAGGTAGACCTTTGGTTGTTCAAAGCCGGCTTTTACGGCGGCAACTTTTTCTCGGGCCTGTTTATCTTATTCCTCGTACTGGGTATTGTGCGCATGCTCATCATCCTGGTATTATCTATACTGCAAAGACGGAAAGACAAACGAACGGTACTGCCTCCGCTGGCGGGCTCTCCACTGGTATCTATTATTGTACCCGCTTATAACGAGGAAGTGAATGCCGTTGGCTCGCTGCACAATCTCCTGCGTTGCGACTATCCCAATTTCAATCTCATTTTTGTAGATGATGGCAGCGGCGACCATACGTTCGACCAGGTGAATGAAGCATTCAAAAACCATCCGTTGGTGAAAGTATTCAGCAAACCTAACGGTGGAAAAGCTTCTGCATTGAATTTCGGCATCAGTCATACCGATGCCGAATATGTGGTTTGTATTGACGCCGATACCAAATTATTACCCAATGCCGTGAGCCTGATGATGCGGCATTTTGCCGATGAGGACGCCGGCGCTGTAGCAGGTAATGTGAAAGTGGGCAATGAAGTGAACATCCTCACACACTGGCAGAGCATTGAATACATTTCAAGCCAGAATATCGACCGCAATGCATTTGCGTATTTCAACGGCATCACCGTTGTTCCAGGCGCCATTGGCGCTTTCCGGAAGCAAGCCATTGAAGACGCAGGCGGGTTTACCACCGATACACTGGCCGAAGATTGTGATCTTACTATTCGTATCCTGCGCTGTGGTTATAATATCAAAAATGAAAACAAAGCCATTGCATATACTGAAGCGCCGGAAACATTGAAACAGTTCATGAAACAACGTTTCCGCTGGACCTTTGGCGTAATGCAGACTTTCTGGAAAAACAGGGATGCGCTCTTCAATTTCAAAACAGGCCGGGTGGGCTGGATTGTTTTACCCGATATGCTGTTGTTCAAATACATTGTGCCTTTTTTAACACCTATTGCCGACCTGCTGATGCTGATTGGTTTATTAACAGGGAATATCGCGCAAATAGGCGCCTATTACCTGCTTTTCCTACTGGTAGACCTGGTCATCGCCATGGTTTCCTTCCGGTACGAGCGTGAAAACATGCTGAAGCTGGTATCGCTCATACCACAACGGATCATTTACCGCTGGCTGATGCTGATTGTACTGCTCCGGGCCTTTAAGCGGGCCATCCAGGGCGAGCTGCAGCATTGGGGCGTTTTAAAAAGAACCGGAAATGTAAAGGAAGTCGTGACGGTCAATTAA
PROTEIN sequence
Length: 1133
MNRETAQIFQTNNASRWQRTKWGSRLVLFLLLIGATAFVIAYNYSANKPQQLPVFQDEIKKKVLQPDKPTEPITKEYQGIRKFINDKWAKGLGCGQNNQVIDLSSSPYFNDSVGIRAAFYVNWDPQSLISLQKNIDKINLVIPEWFFLDTKGDSLLLDIDRNALGIMKAAGIKIMPLLTNNFQKTWHGDVVHRIINDPVKKSKLINDIIRVCKIYDLSGVNIDFEALIEAKNEVLTAFQKELYEKMHAAGLMVSQDVSPFNEDYDQAALANYNDYLFLMAYDEHSADSRPGPISSQRWVEKALDQVTKKIPPGKVVLCMAAFGYDWVNGGGSGSTTTLAYRDAITVARESEGQIRFDNDTYNLSYLYYDEINDLHEVHFTDAATNFNTLRFATEYQLAGTALWRLGSEDLRLWQFYNKSMNKDALRQFDFSIFNKMAGSNNVDYIGSGDIMKVIAMPRSGHISIQIDSAAGLIAEETYDSLPSMFMVKQMGAPQGKKLVLTFDDGPDPKYTGKVLDILSHYHVPAAFFLVGIEAEKHIPLVQRIYREGHEIGNHTFTHPNIAKVGKQRADLEINATRLLIECITGHSTILFRAPYSDADNDNPGEMEALLPISLRRTKDYLTIGENIDPKDWQTDADYTLTADTIFNRVVRQKDTGNIILLHDAGGDRNATIEALPRIIEYFQKNGYQFVSIANLLGRKKDEMMPPLPKGSGYDLMQVDLWLFKAGFYGGNFFSGLFILFLVLGIVRMLIILVLSILQRRKDKRTVLPPLAGSPLVSIIVPAYNEEVNAVGSLHNLLRCDYPNFNLIFVDDGSGDHTFDQVNEAFKNHPLVKVFSKPNGGKASALNFGISHTDAEYVVCIDADTKLLPNAVSLMMRHFADEDAGAVAGNVKVGNEVNILTHWQSIEYISSQNIDRNAFAYFNGITVVPGAIGAFRKQAIEDAGGFTTDTLAEDCDLTIRILRCGYNIKNENKAIAYTEAPETLKQFMKQRFRWTFGVMQTFWKNRDALFNFKTGRVGWIVLPDMLLFKYIVPFLTPIADLLMLIGLLTGNIAQIGAYYLLFLLVDLVIAMVSFRYERENMLKLVSLIPQRIIYRWLMLIVLLRAFKRAIQGELQHWGVLKRTGNVKEVVTVN*