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SCN18_30_10_14_R2_B_scaffold_518_24

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(28212..29093)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C44E9 similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 293.0
  • Bit_score: 510
  • Evalue 1.10e-141
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 293.0
  • Bit_score: 444
  • Evalue 2.10e-122
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 293.0
  • Bit_score: 444
  • Evalue 1.00e-121

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Taxonomy

SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → Bacteria

Sequences

DNA sequence
Length: 882
ATGTTCAACCCGTTCACGGAAGCCCTCGACGAATCGGACGACCTCGCTCTGGTTGAATCGGCGCGGGGCGGCGGTCGTGAGTCTCTGGAGAAGCTGATCCTGCGGCACCAGGCGTGGGTCTACAACATCGCCGTCCGCATGGTCTTCCACCCGCAGGACGCCGAGGAGGTGACGCAGGAGGTGCTCATCAAGGCCGTCACCCGGCTGAGCACGTTTGGGGGCGACTGCGCGTTCCGCACCTGGCTCTACCGGATCGCTGCGAACCACGTGCTGAACATGAAGCGCCGCGGCGGCGAACTCCGGCCGCTGACATTCGCCTCCTATGCGGCGGCCATCAACGACACGCCCGATCTGGACCTGCCCGACCCGAAGAGCGTCCCCGTGGACGTGCCGCTGATGGTCGAGGAGGCCAAGATCGGTTGCACGACCGGGATGCTGCTGTGCCTCGACCGCAAGCAGCGGCTCGTCTTCACCCTCGGGGAGATCTTCGGCGTCAGTGACACCGTCGGCGCTGACGTCCTGGAGATGTCGCCCGACAACTTCCGGCAGAGTCTGGCACGCGCCCGCCGCGACCTGTACCAGTTCATGCACGGCCAGTGCGGGCTGGTGAACGCGGACAACCCGTGCCGGTGCCCCAAGAAGACGAAGGGGTTCATCGACCACGGGCACGTCGATCCCGCCCACCTGCTCTTCGTCCCGCTTCACGTCCGGCGGGTCCGGGAGGAGGCGGCCGGCACGGTCCGCGAGATCGAGGACGTCCTCGACCGCCATTACGCGGCCGTTTATCGCGATCACCCCTTCCTCGAGCCGCGTGACCAGACCGACTGGCTCCGGCGGGTCTTCGACCGGCCGGACGTCCGCACGACGCTGCACCTCGACTGA
PROTEIN sequence
Length: 294
MFNPFTEALDESDDLALVESARGGGRESLEKLILRHQAWVYNIAVRMVFHPQDAEEVTQEVLIKAVTRLSTFGGDCAFRTWLYRIAANHVLNMKRRGGELRPLTFASYAAAINDTPDLDLPDPKSVPVDVPLMVEEAKIGCTTGMLLCLDRKQRLVFTLGEIFGVSDTVGADVLEMSPDNFRQSLARARRDLYQFMHGQCGLVNADNPCRCPKKTKGFIDHGHVDPAHLLFVPLHVRRVREEAAGTVREIEDVLDRHYAAVYRDHPFLEPRDQTDWLRRVFDRPDVRTTLHLD*