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SCN18_30_10_14_R2_B_scaffold_21828_2

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 978..1535

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D899_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 182.0
  • Bit_score: 211
  • Evalue 6.70e-52
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 182.0
  • Bit_score: 211
  • Evalue 1.90e-52
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 182.0
  • Bit_score: 211
  • Evalue 9.40e-52

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Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCACAGGCGGCGGAGGTCGAGGCGGTCATCAACGGCGTGCTCTGCGGCGACCGCGACGCCTTCCGACGGCTTGTCGACCTCTACGCGCTTCCGCTCCGGAGTTACCTCGCGAGCCAGGTCTACCGGCTCGACGACGTGGACGACCTGGCCCAGGAGGTGTTCATCGCCGCCTACCAGCGGCTCGGCACGTTCCGGGGCGGCGACGACTTCGCCGCGTGGCTCCGCGGGATCGCGCACAACGAGGTGCTCATGTACTTCCGGAGTACCGCGCGGCGGGAGTCGGCGCTGTGTCGGTTCCGGGACGAGGTGACGCGGGTCGCCCGCGCCGACCTCGACCGGGCCACGGCCGGCGACCGGTCGGACCTTATCGAGCGGCTGCTCCGGTGCGTCGCGGGCCTCCCGGAGCGACTCCGCCGGGTCGTGCGGGCGGAACTCGACGGTGACAAGTTGGCCGCCCTCGCCACCGAAATGGGCACGACCCCTGTGGCGGTTTACAGCCTGCACTACCGGGCGAACCGGCTGTTGCGCGAGTGCCTGGGCAAGGGGGCGGTGTGA
PROTEIN sequence
Length: 186
MAQAAEVEAVINGVLCGDRDAFRRLVDLYALPLRSYLASQVYRLDDVDDLAQEVFIAAYQRLGTFRGGDDFAAWLRGIAHNEVLMYFRSTARRESALCRFRDEVTRVARADLDRATAGDRSDLIERLLRCVAGLPERLRRVVRAELDGDKLAALATEMGTTPVAVYSLHYRANRLLRECLGKGAV*