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SCN18_14_9_16_R4_B_scaffold_1001_5

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1569..2285

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B446E6 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 234.0
  • Bit_score: 348
  • Evalue 4.50e-93
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 216.0
  • Bit_score: 329
  • Evalue 6.20e-88
RNA polymerase sigma 70 {ECO:0000313|EMBL:AJP72032.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 216.0
  • Bit_score: 329
  • Evalue 3.00e-87

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
TTGCGCCCGCGCGCCTATCTTACAAATACAGACCGGGCAGAGCCGGTCGCGACGGGGAATGATCGCGACAGCATGACGCAGGATCCATCGCAGGCTGATGGGGCGGATGTGACGTCGCCGGGTGGGCACGTCGCGCTTTCCGACCCCGAGTTCAAGACGGAGTTGGCACAGGTCATGCCGCATCTGCGCGCCTTCGGGCGCTCGCTTTCGGGCAACCGCGATCTCGCGGACGATCTGGTGCAGGAAACCCTGCTCAAGGCATGGGCGGCGCGCAAACGCTTCCAGGCTGGCACCAATATGCGCGCCTGGACCTTCATCATCTTGCGCAACCTCTATCTTTCGCAGATGCGGCGCTCGCGCTTCCGCGGCGAATGGGACGATCTCGTCGCCGATCGCCTGCTCGCTGCGCCGGCGGGGCAGGACAAGCATGTCGAACTGGCAGACATGCAGCGCGCATTGCTCATGCTGCCGCAGCCGCAGCGCGAGGCGCTGATCCTCGTCGGTGCGGGTGGCTTTGCTTATGAGGAAGCCGCGGAAATCTGCGGGGTTGCGGTCGGCACGATCAAGAGCCGCGTCGCGCGCGGTCGCGTCGCGCTGGAGGCGCTGATGAGCGGTCGCGACATGACCGGGCGCACCGGGCAGAAGAGCGACGAATCGGGCCGCACCACCCTCGATACGATCATGCACGAAGTGGACGAATTGAGCCGCGATCGCTGA
PROTEIN sequence
Length: 239
LRPRAYLTNTDRAEPVATGNDRDSMTQDPSQADGADVTSPGGHVALSDPEFKTELAQVMPHLRAFGRSLSGNRDLADDLVQETLLKAWAARKRFQAGTNMRAWTFIILRNLYLSQMRRSRFRGEWDDLVADRLLAAPAGQDKHVELADMQRALLMLPQPQREALILVGAGGFAYEEAAEICGVAVGTIKSRVARGRVALEALMSGRDMTGRTGQKSDESGRTTLDTIMHEVDELSRDR*