ggKbase home page

SCN18_14_9_16_R4_B_scaffold_1695_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1..3165

Top 3 Functional Annotations

Value Algorithm Source
AcrB/AcrD/AcrF family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WWQ6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 1008.0
  • Bit_score: 1509
  • Evalue 0.0
DNA, contig: SP636 {ECO:0000313|EMBL:GAN14346.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 1008.0
  • Bit_score: 1509
  • Evalue 0.0
acrB/AcrD/AcrF family protein similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 903.0
  • Bit_score: 1216
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3165
CCGGCCCCGCCCAGCCTGCCCGCGTTCGCGCCGTGGATGATCGCGCAGCAGAAGGGCTACTACGCGCAAGAGGGCCTGAAGATCAATTTCGTGGTCGGCAAGGGCGGCGCCGACGTCGCCAAGCAGGTGGGCGCGGGCAATGCGCCGCTGGGCGGCGGCGTGGGCGATACGCCCATCATCGTCCGGCCCAACGGCGTACCGGTCAAGGCGGTCGCGGTGCTGGGCGGGGCCTCGCTGATGCACCTGGCCATCAACCGCGCCGCCGCGCCGGGCGGGATCCCCGACCTGAAAGCCAAGACCATAGGCGCGATGTCCTACGCCGACACGACCTATTACGCGCTGCTGGGCATGCTGCGGGCGAACGGCGTGGCGAAGTCCGCGGTCGACATCCAGGCCAGCGGTCCCTCGGTCTGGCAGCTCTTTGCCGAGCAGAAGATCCCCGCGCTGGCCTCGGTGCAGGGCGCCGCCATCCCCTCGCCTTATGGCGGCAAGGAACGGCAGATCCAGGTCGATCTCGATCCCGCGCAGCTCGCCGCGCACCGCCTGTCGGCGACCGACGTCGCCGCCGCGCTCGCCGCGCAGAACCAGATCGTCCCCGCCGGCACCGCCAAGATCGGGCAATACGAATATAATCTGAAGCTCAACAACAGCCCGTCGGCGATCGACGATCTCAACCGGCTGCCGATCAAGACGGTCGACGGCGCGACGGTGACGATCGGCGACGTCGCGCACGTCCGCGACGGATCGCCGCCGCAGCGCAATGCGGTGCGCGTCGACGGTGGCCGCGCGGTGCTGATGACGGTGCTCAAGAGCGGTTCGGCCTCGACGATCGCGATCGTCGATCAGGTGAAGGCGGTGCTGCCCAAATTGCGCGAGACGCTGCCGCCCTCGCTCAAGATCGACCTGCTCGCCGATCAGTCGCTGTTCGTGAAGGCGGCGGTCTCCGGCGTGGTGCGCGAAGGCGCGATCGCCGCGGCGCTGACCAGCCTGATGATCCTGATGTTCCTCGGCTCGTGGCGCTCGACCGTGATCATCGCCGCATCGATCCCGCTGGCCGTGCTCGCTGCGGTCGCGGGGCTCGCCGCGGCGGGGCAGACGCTCAACATCATGACCTTGGGCGGGCTGGCGCTCGCGGTCGGCATCCTCGTCGACGATGCGACGGTGACGATCGAGAATATCAACTGGCACCTCGAGCAAGGCAAATCGGTGCGTCAGTCGATCCTCGACGGCGCCGAGCAGATCGTCGGCCCGGCGTTCGTCTCCTTGCTGTGCATCTGCATCGCCTTCCTGCCGATGTTCTTCCTGCCGGGGGTCGCGGGCTTCCTGTTCGCGCCGATGGCGATGGCGGTGGTGTTCGCGATGATCGCCTCGTTCGTCCTGTCGCGCACGCTTGTGCCGACAATGGGCAATTACCTGCTGCGCGATCACGCCACCCCGCACACCGCCGAGGTGATGCTGAGCCACGACGCTAAGGCTGGCCGCCCCAAAACCCGCAATCCTTTCCGTCGTTTCCAGCATGCTTTTGAGAGCAAGTTCGAGCGCGTGCGCGGCTATTATGTCGAGGTGCTGGCTTTTGCGCTGGCGCGGCGCAAGCCGTTCGTGATCGGCTTCATGGCGGTGGTTTTGCTGTCGTTCGCGCTGGCGCCGATGCTCGGGCGAACCTTCTTCCCGACGGTCGATTCCGGCCAGATCAACCTCCACGTCCGCGCCCCGGTCGGCACCCGGCTGGAGGAGACCGCGGCGTTGTTCGATCATATCGAGGATCGCATCCGCCAGATCGTCCCGCCCGATCAGCTCGACGCGATCGTCGACAATATCGGCCTGCCGGTCAGCGGCATCAACCGCGCTTATTCCACCACCGGCGGGGTCGGGCCGCAGGACGGCGACATCATGATCACGCTGAAGGAAGGCCATGCGCCGACCGCCGGCTTCGTCCGCACCTTGCGCCGCGCGCTGCCCGCGGCCTTCCCCGGATCGACCTTCTCCTTCCTTCCGGCGGATATCGTCAGCCAGATCCTCAATTTCGGCGCCCCCGCCCCGATCGACGTGCAGATCGCCGGGCCGGATATGAAGGGCGGCGCGGCCTATGCCCGGATGCTCGCCGCGCGGCTCGCGCGCGTCCCCGGCATCGCCGATGTCCGCGTGCAACAGGCGGACAATTATCCCGAACTCGGCTTCGACGTCGATCGCGCGCAGGCCGATCGGCTCGGCATCACCGAGAATGACGTGACCCGCAACCTGTCGGTCGATCTCGCCGGCAGCTTCCAGATCGCGCCGACCTTCTGGCTCAACCCGAAGAACGGCGTTTCCTATCCGATCGTGGTGCAGGCGCCGCAATATCGCACCGAAAGCATGGCGCAGCTGTCCAACCTGCCGGTCTCGGGCACCAAGCCGGGGACGTTCCAGGTGCTCGGCGCGCTCGGCACGTTGCATCGCGAGATCAGCCCGGCGGTGGTGTCGCATTATGCGGTCCAGCCGGTGTTCGACGTCTATGCGACGACGCAGGGCCGCGATCTCGGTGCGGTGGCGGGCGATATCCAGAAGGTGCTCAATGCCACCCACGGCGCCTTGCCCAAGGGCGCGACGGTCGCGCTGCGCGGGCAGGTCGAGACGATGAATACCGCCTTCACCGGGCTGTTCATCGGGCTCGCCGGGGCGATCGTGCTGATCTACCTGCTGATCGTCGTCAATTTCCAGAGCTGGCTCGATCCGTTCGTGATCGTGACCGCACTGCCCGCCGCGCTCGCCGGGATCGTGTGGATGCTGTTCGCCACCCATACGCCGCTGTCGGTGCCGGCCCTGACCGGCGCGATCATGTGCATGGGCGTCGCCACCGCCAATAGCGTGCTGGTGGTGAGTTTCGCCCGCGAGCGGCTCGCCGCCAGTGGCAACGCCTTGCGCGCTGCCGCCGAGGCCGGCGCGACGCGTTTCCGCCCGGTGCTGATGACCGCGCTCGCGATGATCATCGGCATGGCGCCGATGGCGCTCGGCCTCGGCGAAGGCGGCGAGCAGAATGCCCCGCTCGGCCGCGCGGTGATCGGCGGGCTGATCTGCGCGACGATCGCCACGCTGGTTTTCGTCCCCGTCGTCTTTGCCATCGTCCACGGCCGCAAGGAGCAGGCGGTCGCCCCACCCGAACCCGTCGGAGAACCGATCCATGCATGA
PROTEIN sequence
Length: 1055
PAPPSLPAFAPWMIAQQKGYYAQEGLKINFVVGKGGADVAKQVGAGNAPLGGGVGDTPIIVRPNGVPVKAVAVLGGASLMHLAINRAAAPGGIPDLKAKTIGAMSYADTTYYALLGMLRANGVAKSAVDIQASGPSVWQLFAEQKIPALASVQGAAIPSPYGGKERQIQVDLDPAQLAAHRLSATDVAAALAAQNQIVPAGTAKIGQYEYNLKLNNSPSAIDDLNRLPIKTVDGATVTIGDVAHVRDGSPPQRNAVRVDGGRAVLMTVLKSGSASTIAIVDQVKAVLPKLRETLPPSLKIDLLADQSLFVKAAVSGVVREGAIAAALTSLMILMFLGSWRSTVIIAASIPLAVLAAVAGLAAAGQTLNIMTLGGLALAVGILVDDATVTIENINWHLEQGKSVRQSILDGAEQIVGPAFVSLLCICIAFLPMFFLPGVAGFLFAPMAMAVVFAMIASFVLSRTLVPTMGNYLLRDHATPHTAEVMLSHDAKAGRPKTRNPFRRFQHAFESKFERVRGYYVEVLAFALARRKPFVIGFMAVVLLSFALAPMLGRTFFPTVDSGQINLHVRAPVGTRLEETAALFDHIEDRIRQIVPPDQLDAIVDNIGLPVSGINRAYSTTGGVGPQDGDIMITLKEGHAPTAGFVRTLRRALPAAFPGSTFSFLPADIVSQILNFGAPAPIDVQIAGPDMKGGAAYARMLAARLARVPGIADVRVQQADNYPELGFDVDRAQADRLGITENDVTRNLSVDLAGSFQIAPTFWLNPKNGVSYPIVVQAPQYRTESMAQLSNLPVSGTKPGTFQVLGALGTLHREISPAVVSHYAVQPVFDVYATTQGRDLGAVAGDIQKVLNATHGALPKGATVALRGQVETMNTAFTGLFIGLAGAIVLIYLLIVVNFQSWLDPFVIVTALPAALAGIVWMLFATHTPLSVPALTGAIMCMGVATANSVLVVSFARERLAASGNALRAAAEAGATRFRPVLMTALAMIIGMAPMALGLGEGGEQNAPLGRAVIGGLICATIATLVFVPVVFAIVHGRKEQAVAPPEPVGEPIHA*