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SCN18_14_9_16_R4_B_scaffold_4514_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(1..381)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 126.0
  • Bit_score: 185
  • Evalue 2.90e-44
16S rRNA methyltransferase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287B135 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 127.0
  • Bit_score: 182
  • Evalue 1.80e-43
mraW; S-adenosyl-methyltransferase MraW similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 128.0
  • Bit_score: 178
  • Evalue 9.40e-43

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
GTGACCGCGCCGGCCGACCCCCATATCCCGGTGCTGCTCGACGAGGTGCTGGCGGCGCTTGCCCCGGCGCCCGGTGAGACGATGGTCGACGCGACCTTCGGCGCGGGGGGCTATACCCGCGCCCTGCTCGCCACGGGCGCGCGGGTGTTTGCCTTCGATCGCGATCCCGATGCGATTGCCGCCGGACGCGCGCTGGAAAGCGCCGAGGCCGGGCTGATTCTCGTTCCGGCCGAATTTTCCGCCCTGGCCGGCGAGCTTGAGGCGCGTGGCGTGCCCCCGGTCGACGGCGTGGTGATGGATATCGGCGTCTCGTCGATGCAGCTCGACCGGCCTGAGCGCGGCTTCTCCTTCCAGGGCGACGGGCCGCTCGACATGCGCATG
PROTEIN sequence
Length: 127
VTAPADPHIPVLLDEVLAALAPAPGETMVDATFGAGGYTRALLATGARVFAFDRDPDAIAAGRALESAEAGLILVPAEFSALAGELEARGVPPVDGVVMDIGVSSMQLDRPERGFSFQGDGPLDMRM